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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55934.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  55/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.97.3
:149 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->125 2kksA PDBj 1e-13 32.8 %
:RPS:SCOP  1->131 1oi0A  c.97.3.1 * 3e-04 20.0 %
:HMM:SCOP  1->131 1oi0A_ c.97.3.1 * 9.3e-28 36.1 %
:HMM:PFM   3->98 PF01398 * Mov34 2.8e-16 20.8 96/116  
:BLT:SWISS 1->131 Y1369_MYCBO 2e-62 82.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55934.1 GT:GENE BAD55934.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1207027..1207476 GB:FROM 1207027 GB:TO 1207476 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55934.1 LENGTH 149 SQ:AASEQ MLVIKSDLVAAMVAHARADHPDEACGVIAGPEGSDRPERFIAMTNAERSPTFYRFDSGEQLKVWREMDAADEEPVVIYHSHTATEAYPSRTDISYASEPNAHYVLISTRDPEQHELRSYRILDGVVTEEPVRVVDDYDTDDHDTVTPGA GT:EXON 1|1-149:0| BL:SWS:NREP 1 BL:SWS:REP 1->131|Y1369_MYCBO|2e-62|82.4|131/146| SEG 133->146|vvddydtddhdtvt| BL:PDB:NREP 1 BL:PDB:REP 1->125|2kksA|1e-13|32.8|125/146| HM:PFM:NREP 1 HM:PFM:REP 3->98|PF01398|2.8e-16|20.8|96/116|Mov34| RP:SCP:NREP 1 RP:SCP:REP 1->131|1oi0A|3e-04|20.0|105/108|c.97.3.1| HM:SCP:REP 1->131|1oi0A_|9.3e-28|36.1|119/0|c.97.3.1|1/1|JAB1/MPN domain| OP:NHOMO 56 OP:NHOMOORG 55 OP:PATTERN -------------------------------------------------------------------- ---11---------1--11-11--1111-11111111-111111----------------111-1111111-----------------------------------------------------------1--------------1-------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------11-----------------------1--2----11-----------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1------------------111-1-1-------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 127 STR:RPRED 85.2 SQ:SECSTR cEEEEHHHHHHHHHHHHHHTTccEEEEEEEEEETTEEEEEEcccccccccccccccHHHHHHHHHHHHHHTcEEEEEEEEEccccccccHHHHTTccccccEEEEEEcccccccEEEEEEEcccEcc###################### DISOP:02AL 148-150| PSIPRED cEEEcHHHHHHHHHHHHHccccEEEEEEEEcccccEEEEEEEccccccccEEEEEcHHHHHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHHcccccEEEEEccccccEEEEEEEEEcccEEEEEEEEEEcccccccccccccc //