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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55939.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  171/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:284 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   34->283 1zkpC PDBj 1e-18 30.5 %
:RPS:PDB   32->265 2dkfA PDBj 8e-15 21.9 %
:RPS:SCOP  32->283 1zkpA1  d.157.1.9 * 4e-50 29.0 %
:HMM:SCOP  31->284 1y44A1 d.157.1.7 * 4.3e-55 33.5 %
:HMM:PFM   47->204 PF00753 * Lactamase_B 3.3e-10 24.0 146/194  
:BLT:SWISS 29->284 Y1173_MYCLE e-100 67.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55939.1 GT:GENE BAD55939.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1210043..1210897 GB:FROM 1210043 GB:TO 1210897 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55939.1 LENGTH 284 SQ:AASEQ MHGAPARPGGPRGFSGDRFVSEISSWQHVGMRLTVLGCSGSVSGPDSPASGYLLTGPDMTPVVIDFGPGVLGALQRYADPGEVDIFLTHLHADHCLDLPGLLVWRRYHPTPPVGRAIVRGPSDSALRIGNASAEVGGECDDWSDVIDLRPWQEGETVEFGPGHTIAARRMFHPPESYGLRITTNAGRTFVYTGDTAMCDAVQELAQGADVLMAEASWTHDPANRPPGIHLSGTEAGRIAARAGVGELLLTHIPPWTSREDVIAEAKAEFTGPVHAVAPGEVFDL GT:EXON 1|1-284:0| BL:SWS:NREP 1 BL:SWS:REP 29->284|Y1173_MYCLE|e-100|67.7|254/284| SEG 3->13|gaparpggprg| BL:PDB:NREP 1 BL:PDB:REP 34->283|1zkpC|1e-18|30.5|236/240| RP:PDB:NREP 1 RP:PDB:REP 32->265|2dkfA|8e-15|21.9|224/424| HM:PFM:NREP 1 HM:PFM:REP 47->204|PF00753|3.3e-10|24.0|146/194|Lactamase_B| RP:SCP:NREP 1 RP:SCP:REP 32->283|1zkpA1|4e-50|29.0|241/244|d.157.1.9| HM:SCP:REP 31->284|1y44A1|4.3e-55|33.5|248/0|d.157.1.7|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 195 OP:NHOMOORG 178 OP:PATTERN --1------------------------12---------------------21---------------- ----211111111111122-211111122121111111111121-1111---111111--221-2121211-----------1-----------------------------------------------------1--11----1--1-11---11111111-11----1---------------------11111111111111111-1--11111111-1--1111112---------------------1-1-1------11--1-1-1---111---1----11------------1111-11111-1---------1-------------------1-----1------1--11----1-111----1------------------------------------11--111--------1---------1----1-------------------------------------------------------------------------------------------------------------------------------------1--------------------11-2-1-----------------------------------------------------------------------------------------------------------------------1-11111111-1-1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------1--------------------------------------------------------------------------1-------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 266 STR:RPRED 93.7 SQ:SECSTR #################ccEEEc#EEEEEccEEEEcccccccccccccccEEEEEETTEEHEEEEEcccGGGTTTTTccccccEEEccccccTTTTTHHTHHHHHTTccccEEEcHHHHHHHHHHHHHHHHccccccHHHHHHHHTTEEEccccccEEccTccEEEEEEccccTTcEEEEEEEcTTEEEEEccccccTTccccccccccEEEEEcTTcccccccHHHHHHHHHHHHHHHHHTTcEEEEEEcTTHHHHHHHHHHHTHHTTcccEEEccTTcEEEc DISOP:02AL 1-20| PSIPRED cccccccccccccccccccHHHccccccccEEEEEEEEcccccccccccEEEEEEEcccEEEEEEccHHHHHHHHHcccccEEEEEEEEccHHHHccHHHHHHHHHcccccccccccccccHHHHHHHHHccccccccHHcccccccEEEEccccEEEEcccEEEEEEEcccccccEEEEEEEcccEEEEEEEcccccHHHHHHHccccEEEEEccccHHHHHHHccccccHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHccccEEEEEcccEEEc //