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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55956.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  51/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.7.12
:227 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->112 1xwmA PDBj 1e-06 27.5 %
:RPS:SCOP  11->216 1xwmA  a.7.12.1 * 7e-18 21.0 %
:HMM:SCOP  10->218 1xwmA_ a.7.12.1 * 2.1e-27 26.6 %
:RPS:PFM   25->109 PF01895 * PhoU 3e-05 32.9 %
:HMM:PFM   24->109 PF01895 * PhoU 9.9e-10 27.1 85/88  
:BLT:SWISS 7->216 PHOU2_MYCTU 9e-19 31.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55956.1 GT:GENE BAD55956.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1237919..1238602) GB:FROM 1237919 GB:TO 1238602 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55956.1 LENGTH 227 SQ:AASEQ MGENSRVRTQFTHELIALTNDLTLMCRLAHDSLERVVDALAGADLTAAYEVFALEEQLHKMHGTCEARTVALLALQAPVARDLRHVVTAMQIADQLSGIGTLTSAVADQVYRHHPGHVAAQPILSALTELGGVAAARLAAAGEAVTTGHPADDPAPGASVAELRARLHAALSDPDRPETPAVVIDLTLLGSHLERCVERAERIDRLIRFLDTGIPPTAQPGPELPAD GT:EXON 1|1-227:0| BL:SWS:NREP 1 BL:SWS:REP 7->216|PHOU2_MYCTU|9e-19|31.1|206/213| SEG 129->145|elggvaaarlaaageav| BL:PDB:NREP 1 BL:PDB:REP 11->112|1xwmA|1e-06|27.5|102/212| RP:PFM:NREP 1 RP:PFM:REP 25->109|PF01895|3e-05|32.9|85/89|PhoU| HM:PFM:NREP 1 HM:PFM:REP 24->109|PF01895|9.9e-10|27.1|85/88|PhoU| RP:SCP:NREP 1 RP:SCP:REP 11->216|1xwmA|7e-18|21.0|200/212|a.7.12.1| HM:SCP:REP 10->218|1xwmA_|2.1e-27|26.6|207/0|a.7.12.1|1/1|PhoU-like| OP:NHOMO 71 OP:NHOMOORG 51 OP:PATTERN -------------------------------------------------------------------- -----11111111111223-42111222222111112143---11--1----111-11------1-1111-------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1-------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 102 STR:RPRED 44.9 SQ:SECSTR ##########HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH################################################################################################################### DISOP:02AL 1-5, 8-9, 217-227| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccc //