[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55957.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  171/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:364 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   35->183 PF01699 * Na_Ca_ex 0.0009 16.0 131/139  
:HMM:PFM   230->360 PF01699 * Na_Ca_ex 8.5e-17 26.6 128/139  
:BLT:SWISS 24->350 Y4HA_RHISN 8e-39 43.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55957.1 GT:GENE BAD55957.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1238701..1239795 GB:FROM 1238701 GB:TO 1239795 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD55957.1 LENGTH 364 SQ:AASEQ MIRALRDRWTVFVPLLAAVVLAATWGRSLPSVGVVVVAAFLIGAVLSAVYHAEVVAERVGEPFGALVLAVAVTVIEVALIVTLMISGGEKSATLARDTVFAAVMITCNGIFGLALLVAALRRRVAEFNAEGTGAALATVATLATLSLVLPTFTSSVPGPEFSTPQLAFAAIASLSLYGLFVMVQTVRHRDDFLPPVQADGVVTDDDLHDERPSTRAALLSLALLLLALTGVVGLAKVVSPSIESAVATAGMPHAAVGVVIALLVLLPETLAAVRAARRDRLQISLNLALGSAMASIGLTIPVIAVATIWLPGPLILGLGATQMVLLALTVVVGVLTVVPGRATLLQGGVHLALFSAFVFLAASP GT:EXON 1|1-364:0| BL:SWS:NREP 1 BL:SWS:REP 24->350|Y4HA_RHISN|8e-39|43.5|317/367| TM:NTM 11 TM:REGION 8->30| TM:REGION 32->54| TM:REGION 63->85| TM:REGION 97->119| TM:REGION 134->156| TM:REGION 163->185| TM:REGION 216->238| TM:REGION 250->272| TM:REGION 283->305| TM:REGION 314->336| TM:REGION 341->363| SEG 11->23|vfvpllaavvlaa| SEG 113->125|lallvaalrrrva| SEG 131->151|gtgaalatvatlatlslvlpt| SEG 216->228|aallslallllal| SEG 254->266|aavgvviallvll| SEG 271->280|aavraarrdr| SEG 310->319|lpgplilglg| SEG 324->338|vllaltvvvgvltvv| SEG 351->363|lalfsafvflaas| HM:PFM:NREP 2 HM:PFM:REP 35->183|PF01699|0.0009|16.0|131/139|Na_Ca_ex| HM:PFM:REP 230->360|PF01699|8.5e-17|26.6|128/139|Na_Ca_ex| OP:NHOMO 179 OP:NHOMOORG 171 OP:PATTERN -------------------------------------------------------------------- -11-1----------1111-1-111-11111-----1-11-----------1------------1--11------------------------------1-1----11-1-------------------------------------------------1-11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2111----1--1--------------1--1-1-1--1--12212312121----------------------------------------------------------------11---1111111111111111111-1111-1-1-111--1-----------1----1--------------1---1------------------------------------------------------11----------1-11---1--1-1--1----------------11-1111--1111111--111111111-11111111111-----1111111111111111-111---1--111111-1-111-------------1---------------111---------------------------111---------------------111----------------------------------------------------------------------1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 197-213| PSIPRED ccEEHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcc //