[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55969.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  101/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.61.1
:227 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  3->206 1wd5A  c.61.1.1 * 2e-28 28.4 %
:HMM:SCOP  1->211 1wd5A_ c.61.1.1 * 2.1e-41 35.6 %
:HMM:PFM   5->159 PF00156 * Pribosyltran 3.5e-27 42.7 117/125  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55969.1 GT:GENE BAD55969.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1249868..1250551) GB:FROM 1249868 GB:TO 1250551 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55969.1 LENGTH 227 SQ:AASEQ MPFLDRREAGRRLVERVRGFHTADTVVLGVPRGGVPVAYEVAAALGAPLDVAVVRKLRVPYQPELVFGALGEDGVRVVDDKILVRAFVSDSGRAQVETDERAELARTALRLRGGAERLDLHGRTVVIVDDGVATGATARAALATARARGALRTVLAVPVGSVRSIRALAAVADHVVCLETPEMFHSIGHWYRDFAPVEPARVCDLLDGAAAEFRQRARRAAEFRPVR GT:EXON 1|1-227:0| SEG 26->37|vvlgvprggvpv| SEG 99->120|deraelartalrlrggaerldl| SEG 131->157|gvatgataraalatarargalrtvlav| SEG 209->224|aaaefrqrarraaefr| HM:PFM:NREP 1 HM:PFM:REP 5->159|PF00156|3.5e-27|42.7|117/125|Pribosyltran| RP:SCP:NREP 1 RP:SCP:REP 3->206|1wd5A|2e-28|28.4|201/208|c.61.1.1| HM:SCP:REP 1->211|1wd5A_|2.1e-41|35.6|208/0|c.61.1.1|1/1|PRTase-like| OP:NHOMO 127 OP:NHOMOORG 106 OP:PATTERN ------------------------1--1-----------------------11--------------- ---------------1122-21--1-222221-22221111112----------1-----11---121--2-----------1---11------------------------------------------------1111111---2111111--------------21--------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1-------------1--------------------------------1--1--11------------1--------1-1----------------------------------------------------1---------1111---------2-----11-111-------------1111-1--1---------------1--1--------------------1----1-21------------------------111------------------------------------1-----------------------------------------------------------------------------------------------111111111--11--------------------------1-----------------------------------------------------------------------------------------------------------------1- --------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 211-222| PSIPRED cccccHHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHcccEEEEEEEEcccccccccEEEEEcccccEEEcHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHcEEEEEccccccHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccccc //