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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55970.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  132/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
:240 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   25->208 PF01988 * VIT1 1e-16 31.5 %
:HMM:PFM   24->233 PF01988 * VIT1 3.1e-68 48.1 210/213  
:BLT:SWISS 21->153 PCL1_SCHPO 4e-13 41.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55970.1 GT:GENE BAD55970.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1250686..1251408) GB:FROM 1250686 GB:TO 1251408 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55970.1 LENGTH 240 SQ:AASEQ MADSDERISHHEPHSRGLSTRLNWLRAAVLGANDGIVSTAGLVVGVAAATTTQSAIFTAGIAGVSAGAISMAVGEYVSVSTQRDSEEALLAKERRELREDPADELRELAAIYEAKGLSPATARTVAEELTAHDAFTAHAEAELGLDPGALTNPWQAAASSAVSFTLGALLPLLAILLPPVTARIPVTFAAVLVALALTGSISARLGGSNRLRAVVRVVVGGALAMTITYCIGQIADVAGI GT:EXON 1|1-240:0| BL:SWS:NREP 1 BL:SWS:REP 21->153|PCL1_SCHPO|4e-13|41.4|133/100| TM:NTM 4 TM:REGION 26->48| TM:REGION 156->178| TM:REGION 184->206| TM:REGION 215->237| SEG 37->52|vstaglvvgvaaattt| SEG 59->74|agiagvsagaismavg| SEG 86->99|eeallakerrelre| SEG 166->179|lgallpllaillpp| SEG 189->197|aavlvalal| SEG 210->224|rlravvrvvvggala| RP:PFM:NREP 1 RP:PFM:REP 25->208|PF01988|1e-16|31.5|184/211|VIT1| HM:PFM:NREP 1 HM:PFM:REP 24->233|PF01988|3.1e-68|48.1|210/213|VIT1| OP:NHOMO 159 OP:NHOMOORG 141 OP:PATTERN -------------------------------------------------------------------- ----111111---1111--------1------1---111-1-1--1-11---1111----1-11-1-1111------------------------------1----1-------------------------------------1----------------------------------------1---------------------------------------------------------------------2----1---1111--1-2--2111-------111------------------------------------------------------------------------------------1--1111------1--21-21-111----------1--1--1-12-1---------1----12-1--11-----1-222222221--------------------------------------111111111--------------1-------1----1----------11-1--11---11---------11-111-------------------1-------------------------------------------------1---------------------------------------------------------------------11-------------------------------------------------------------1---------------11111111-1-1-----------1--------------1--------------11-----111--------------------------------------------------------------- --------------1-----------------------------------------------------------------------11----------------------------------------------------------------------------------------21-----211--1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 13-17| PSIPRED ccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //