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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55971.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  57/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:313 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   81->313 1f0nA PDBj 3e-11 29.8 %
:RPS:PDB   62->195 3e4dD PDBj 7e-17 23.0 %
:RPS:SCOP  64->308 1jjfA  c.69.1.2 * 6e-26 26.5 %
:HMM:SCOP  18->314 1pv1A_ c.69.1.34 * 5.3e-33 25.6 %
:RPS:PFM   64->195 PF00756 * Esterase 1e-13 38.0 %
:HMM:PFM   64->305 PF00756 * Esterase 4.6e-32 32.1 209/252  
:BLT:SWISS 57->312 CSP1_CORGL 2e-31 32.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55971.1 GT:GENE BAD55971.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1251435..1252376) GB:FROM 1251435 GB:TO 1252376 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55971.1 LENGTH 313 SQ:AASEQ MSGLSRVLVVVLTALASIAVPALLAPQAHAAPIVRWETRVSDRILDIGVSSPHLEGPDWSVKVVRLVLPPGWSPTANRTWPTVWVLHGGFDDHKSWTDKGGLEALTAGREAIFVLPETSWCSAYSDWWNYGAYGPPAWEKYLLEDVRGLLESRYRANTTRAVAGNSMGGLGAMKFAAEYPGMFRAAASFSGNVDPLRESGAPGGPDLPGLGCGADWKRVWGDHAVPAQRAIWQENNPYSRAADLVGIPLFVSYGRTGTVESTVYEQNYRFADRLRAVGAQVDERYVPTDGHDWPAWQRQLGNALPMLLAAVGA GT:EXON 1|1-313:0| BL:SWS:NREP 1 BL:SWS:REP 57->312|CSP1_CORGL|2e-31|32.7|251/657| TM:NTM 1 TM:REGION 3->25| SEG 19->32|avpallapqahaap| SEG 200->215|gapggpdlpglgcgad| BL:PDB:NREP 1 BL:PDB:REP 81->313|1f0nA|3e-11|29.8|228/284| RP:PDB:NREP 1 RP:PDB:REP 62->195|3e4dD|7e-17|23.0|126/265| RP:PFM:NREP 1 RP:PFM:REP 64->195|PF00756|1e-13|38.0|129/221|Esterase| HM:PFM:NREP 1 HM:PFM:REP 64->305|PF00756|4.6e-32|32.1|209/252|Esterase| RP:SCP:NREP 1 RP:SCP:REP 64->308|1jjfA|6e-26|26.5|200/255|c.69.1.2| HM:SCP:REP 18->314|1pv1A_|5.3e-33|25.6|262/0|c.69.1.34|1/1|alpha/beta-Hydrolases| OP:NHOMO 117 OP:NHOMOORG 58 OP:PATTERN -------------------------------------------------------------------- -----31222221311121-1111-122222-3---8AAA-2----1-------------3---211-1--------------------------------------11----------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------111---------------------------------------------------------------------------------------1-------------------------------------------------11---------------------------------------1----------------------------------------211111-------2-------22-----------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- -------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 278 STR:RPRED 88.8 SQ:SECSTR ###################################ccccccTTcccHHcccccccccccccEEEEEEEcGGGGccGTccEEEEEEEccTTcccHHHHHHHcccHHHHHHTcEEEEcccccccTTcccccTTGGGTcHcHHHHHTHHHHHHHHHccEEEEEEEEEcTHHHHHHHHHHHHcTTTccccEEEcccccGGGcEcEEHHHEEEEcccccTTTHHHHHHHHcccGGGGGGGcHHHHHHTTccccEEEEEcTEETTcTTHHHHTcHHHHHHTTcccEEEEEEcTTccccHHHHHHHHHHHHcccHHHHHc DISOP:02AL 1-2| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEcccccccccEEEEEEEEcccccccccccccEEEEEccccccHHHHHHHccHHHHHHHcccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHccHHHHHHHHHccccccccccccHHHHHHHHHHHccccHHHccccccccccHHHHHccHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHHHHHHcc //