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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55979.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  22/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.66.1
:269 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->268 2qe6A PDBj 2e-42 42.9 %
:RPS:PDB   57->137 1eg2A PDBj 1e-04 13.2 %
:RPS:SCOP  75->137 1eg2A  c.66.1.11 * 2e-05 19.0 %
:HMM:SCOP  16->252 1rjdA_ c.66.1.37 * 1.6e-41 27.0 %
:RPS:PFM   8->268 PF04672 * DUF574 8e-43 44.4 %
:HMM:PFM   6->268 PF04672 * DUF574 1.1e-85 43.1 262/268  
:BLT:SWISS 51->126 RLMG_STRAW 4e-04 37.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55979.1 GT:GENE BAD55979.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1260949..1261758 GB:FROM 1260949 GB:TO 1261758 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55979.1 LENGTH 269 SQ:AASEQ MDRPSWAPEGVDMNQASPARMYDALLGGSHNFEVDRMAAEMGKRLVPDLPRLALSNRAFLRRAVRFLVDAGITQFVDIGSGIPTVGNVHEVAQSLDPRVRVLYIDIDPVAVAHARSILRDNDNADAVEADLRKPEDLLARVRESGLIDLDRPVGLLLIAVLHLLADDDRPAERVAALRNAVVPGSYVAISHLTSELRPDDAAALGASAADSSKVGIHFRPAAAIAGMFDGWALVEPGVVELPLWRPESDRDRHEAPGRSLGLAGVGRKA GT:EXON 1|1-269:0| BL:SWS:NREP 1 BL:SWS:REP 51->126|RLMG_STRAW|4e-04|37.1|70/100| SEG 155->168|llliavlhlladdd| SEG 199->212|ddaaalgasaadss| BL:PDB:NREP 1 BL:PDB:REP 6->268|2qe6A|2e-42|42.9|252/259| RP:PDB:NREP 1 RP:PDB:REP 57->137|1eg2A|1e-04|13.2|76/270| RP:PFM:NREP 1 RP:PFM:REP 8->268|PF04672|8e-43|44.4|259/264|DUF574| HM:PFM:NREP 1 HM:PFM:REP 6->268|PF04672|1.1e-85|43.1|262/268|DUF574| RP:SCP:NREP 1 RP:SCP:REP 75->137|1eg2A|2e-05|19.0|58/270|c.66.1.11| HM:SCP:REP 16->252|1rjdA_|1.6e-41|27.0|230/0|c.66.1.37|1/1|S-adenosyl-L-methionine-dependent methyltransferases| OP:NHOMO 156 OP:NHOMOORG 24 OP:PATTERN -------------------------------------------------------------------- ----H-------------------------------3----OBH----------------65--45JACA3------------------------------------------------------------------1111---1-----------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 261 STR:RPRED 97.0 SQ:SECSTR #####cccGGGccccccHHHHHHHHTTcccccHHHHHHHHHHHHccTTHHHHHHHHcHHHHHHHHHHHccTTcEEEETTcTTcHHHcHHHHHHHHHHTcEEEEEEccTHHHHHHHHHHHHcccEEEEEcGGGTHHHHHHcHHHHHHccTTcccEEETTGGGccTTTHHHHHHHHHHHHHHccTTcEEE#EEEEEEcccccHHHHHHHHHHHHHHccccccHHHHHHTTTTcEEcTTccEEGGGccccccccTTccGGGGcE#EEEEEc# DISOP:02AL 1-13| PSIPRED cccccccccccccccccHHHHHHHHcccEEcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccEEEEEcccHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHccccccccccHHHHHHHHcccccccccEEEccccccccccccccccHHHHHHHHHHHcc //