[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55984.1
DDBJ      :             putative ferredoxin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.58.1
:64 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->62 1vjwA PDBj 6e-10 53.6 %
:RPS:SCOP  4->59 1fxdA  d.58.1.4 * 1e-05 27.8 %
:HMM:SCOP  1->64 1sj1A_ d.58.1.4 * 3e-11 31.2 %
:RPS:PFM   1->62 PF06902 * DUF1271 1e-05 41.0 %
:HMM:PFM   1->60 PF06902 * DUF1271 2.1e-10 20.0 55/64  
:BLT:SWISS 1->62 FER_THEMA 6e-10 53.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55984.1 GT:GENE BAD55984.1 GT:PRODUCT putative ferredoxin GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1265895..1266089 GB:FROM 1265895 GB:TO 1266089 GB:DIRECTION + GB:PRODUCT putative ferredoxin GB:PROTEIN_ID BAD55984.1 LENGTH 64 SQ:AASEQ MRVVVDRDRCEGHGMCEALAPDLFRVGDDDVVRPRTDTLGPADRDVAELAVDSCPVQALRLEGS GT:EXON 1|1-64:0| BL:SWS:NREP 1 BL:SWS:REP 1->62|FER_THEMA|6e-10|53.6|56/60| BL:PDB:NREP 1 BL:PDB:REP 1->62|1vjwA|6e-10|53.6|56/59| RP:PFM:NREP 1 RP:PFM:REP 1->62|PF06902|1e-05|41.0|61/63|DUF1271| HM:PFM:NREP 1 HM:PFM:REP 1->60|PF06902|2.1e-10|20.0|55/64|DUF1271| RP:SCP:NREP 1 RP:SCP:REP 4->59|1fxdA|1e-05|27.8|54/58|d.58.1.4| HM:SCP:REP 1->64|1sj1A_|3e-11|31.2|64/66|d.58.1.4|1/1|4Fe-4S ferredoxins| OP:NHOMO 25 OP:NHOMOORG 20 OP:PATTERN -------------------------------------------------------------------- ---------------2211-11--12111112-1111--2----------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 62 STR:RPRED 96.9 SQ:SECSTR cccEEcTTTcccccHHHHHcTTTEEEcTTEEcccccccccTHHHHHHHHHHHHcTTccEEcc## DISOP:02AL 64-65| PSIPRED cEEEEEHHHcHHHccHHHHccccEEEccccEEEEEcccccHHHHHHHHHHHHHcccccEEEEcc //