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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55998.1
DDBJ      :             putative alkanesulfonate monooxygenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  210/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:367 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->355 1nqkA PDBj 9e-29 32.3 %
:RPS:PDB   47->340 1brlB PDBj 3e-14 12.8 %
:RPS:SCOP  47->349 1tvlA  c.1.16.4 * 4e-23 18.1 %
:HMM:SCOP  27->349 1m41A_ c.1.16.4 * 5.2e-44 27.8 %
:RPS:PFM   103->326 PF00296 * Bac_luciferase 2e-05 36.2 %
:HMM:PFM   39->328 PF00296 * Bac_luciferase 2.9e-45 32.6 273/307  
:BLT:SWISS 4->348 SSUD2_RHILO 3e-28 37.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55998.1 GT:GENE BAD55998.1 GT:PRODUCT putative alkanesulfonate monooxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1279391..1280494 GB:FROM 1279391 GB:TO 1280494 GB:DIRECTION + GB:PRODUCT putative alkanesulfonate monooxygenase GB:PROTEIN_ID BAD55998.1 LENGTH 367 SQ:AASEQ MTAFLWRLPTRGDGRRARPESRHRGGFGGPPPTTPATDPRPGRYGPFDDLAQIVDAAELAGLDGVLAPYDPLGEESWIVAGGALRATRYATVVVEFEPGFGTPVYAAKMSATLQRLSRGRLAWRLAVDTDAAQAAARGDTVTGVDRYARAAEFLTVARGVWNAEPVPGSGFDGTGFDFDGDHYQVIDGGFRGILSGLPFPQVQLSGDAPEALDLSARHGDLHVFTESARGPAAALAELRDRAAAAGRTVRAGLELPVVARQTEREAWARVHRQWRETGRDIAEARALDLGDGRWAGFAAFGYPHPVGLVGSYEQVAARLRDYAAAGIDTVVLGGHPHIEEVHRAGEHLLHLADPAGRTLTGAEEVPA GT:EXON 1|1-367:0| BL:SWS:NREP 1 BL:SWS:REP 4->348|SSUD2_RHILO|3e-28|37.1|315/385| SEG 24->43|rggfggpppttpatdprpgr| SEG 126->142|avdtdaaqaaargdtvt| SEG 170->181|gfdgtgfdfdgd| SEG 232->251|aaalaelrdraaaagrtvra| BL:PDB:NREP 1 BL:PDB:REP 6->355|1nqkA|9e-29|32.3|319/345| RP:PDB:NREP 1 RP:PDB:REP 47->340|1brlB|3e-14|12.8|273/319| RP:PFM:NREP 1 RP:PFM:REP 103->326|PF00296|2e-05|36.2|199/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 39->328|PF00296|2.9e-45|32.6|273/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 47->349|1tvlA|4e-23|18.1|299/390|c.1.16.4| HM:SCP:REP 27->349|1m41A_|5.2e-44|27.8|313/0|c.1.16.4|1/1|Bacterial luciferase-like| OP:NHOMO 306 OP:NHOMOORG 211 OP:PATTERN -------------------------------------------------------------------- ----2---221---111----1---3------11113331-1-2-----------------1--1-12-12-----------1-------------------------------------------------------------1-------1--------------1-2---------------------1-11111111111111111-11-111-1-1-----------------------------------------------------------------------------------------------------------------------------------------------------------1--------21113-1-1---1------------11111112-2--2331111111--21-----1-------1-111111----1-----------------------------------1------12233321111111211111113221221--221-11--23--2--2--223--------------------------------------------1------------------------------------------------------------------------1111-111111111111-111111111111111111122211-------------------1---111----111111-1111---------------------------------------3---326536353413321-221------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 340 STR:RPRED 92.6 SQ:SECSTR #####EEccTTcEEccTTccTTEE#####################cHHHHHHHHHHHHTTTccEEEEccccccccHHHHHHHHHHHccccEEEEEEEcTTccHHHHHHHHHHHHHHHTccEEEEEEccccHHHHHHTTcccccTTHHHHHHHHHHHHHHHHHHcEEEEEccGGccccccccccccccEEcccccccTTccEEEEEEccHHHHHHHHHTTccEEEcHHHHHHHHHHHHHHHHHcccTTccccEEEEEEEEcccHHHHHHHHHHHHHHHHHHHccHHHHHHHcTTccHHHHHHHHHHHcEEEcHHHHHHHHHHHHHHcccEEEEEcTTcccHHHHHHHHTcHHHHHTTcccccccccc# DISOP:02AL 357-367| PSIPRED ccEEEEEEcccccccccccccEEEccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHcccEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccHHcccccccccccccEEEEcccEEEcccccccccEEEEEcccHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccEEEccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHcccccccccccc //