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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56012.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  11/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:747 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   653->694 PF09586 * YfhO 2e-05 42.5 %
:HMM:PFM   652->698 PF09586 * YfhO 5.9e-05 35.6 45/843  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56012.1 GT:GENE BAD56012.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1293378..1295621 GB:FROM 1293378 GB:TO 1295621 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56012.1 LENGTH 747 SQ:AASEQ MADRGTLAPRGIYTWGIITALGVVAGYAAVLAANPRHFYTDDTESQYAPLWVMLGRSLREGRFPTMVPEHWLAGNYTIEEAGLLNPPQLLIDLLAPSMDNLALYATVVKLIFAVILALGVYRVCLVYGARAPWAAVAGVAMPFSGWLLFFDEASWWTALTGTAWLAHAWASGVRYARGRSGPIPTFVFLYLVMSVQYIFPAVEAGLVIGAVLVGELIHQRDRRGPLRLALVSVCAAAAGLMTYLPSLLSAKATWRGTAQINNEQLLAVPWSESLNAGLPSTLPAFTSWWGYVQPMPVVYIAWFLIPGLAFVDWRAARAGLRELTAPALFSVAVLMWTAGPGAIGPLRWPARVLPMLALGLLILVCVLLGRYGTVADARKRLLVAGGLLGVLLVRSAAAAPDETVWHLVWVVVLAVLGAGVVALARRGRATAACAVVIVSVVPIAYAQVSAAQPTPLGWNLPTHRSAMKAAFPDFDGTTLQLADRALIRPEERSLDGAYGSLVFGNYAKNLERSYVGGYTPNGHFWFGETLCMRWDTSVCPDAYRRAFATEPSTGRTIVDLMKIDRVVLQRALYPDARDQPAPPGWKWVDYPGHERYIAVLERIDGPVSTRDGRIAAAPGVTATSLAESDTASRVRVSSAEGGRVVFARLGWPGYRATLDGRDVPVDLVGNVFAAVDIPAGTENAELELTWSPPGRPLGMGAAALGLLGVALLQWLYRRDRRDRGDSGDADASPPDVEREPDLVGARP GT:EXON 1|1-747:0| TM:NTM 12 TM:REGION 11->32| TM:REGION 105->127| TM:REGION 131->153| TM:REGION 189->211| TM:REGION 227->249| TM:REGION 292->314| TM:REGION 321->343| TM:REGION 351->373| TM:REGION 381->402| TM:REGION 404->424| TM:REGION 429->449| TM:REGION 697->715| SEG 20->33|algvvagyaavlaa| SEG 83->94|llnppqllidll| SEG 128->140|garapwaavagva| SEG 356->369|lalgllilvcvllg| SEG 377->399|arkrllvaggllgvllvrsaaaa| SEG 410->436|vvvlavlgagvvalarrgrataacavv| SEG 697->712|lgmgaaalgllgvall| SEG 717->732|rrdrrdrgdsgdadas| RP:PFM:NREP 1 RP:PFM:REP 653->694|PF09586|2e-05|42.5|40/813|YfhO| HM:PFM:NREP 1 HM:PFM:REP 652->698|PF09586|5.9e-05|35.6|45/843|YfhO| OP:NHOMO 14 OP:NHOMOORG 11 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------2211-----2---11-1-------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 719-735, 744-747| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHHcccccEEEccccccccccHHHHHHcccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEHHEEccccEEEEccccccccccccHHHHHHHHcccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHccccccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHccccccccccEEEEcccccEEcccccccccEEEEEcccccEEEEEEEccccEEEEEccccccHHHHccEEEEEEccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccc //