[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56019.1
DDBJ      :             putative phosphogluconate dehydratase
Swiss-Prot:ILVD1_NOCFA  RecName: Full=Dihydroxy-acid dehydratase 1;         Short=DAD 1;         EC=4.2.1.9;

Homologs  Archaea  54/68 : Bacteria  742/915 : Eukaryota  117/199 : Viruses  0/175   --->[See Alignment]
c.8.2d.334.1
:568 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   89->535 2gp4A PDBj 1e-33 31.6 %
:RPS:PDB   35->301 2cwlB PDBj 1e-34 11.2 %
:RPS:PDB   349->518 3ejfA PDBj 4e-27 14.7 %
:RPS:SCOP  74->389 2gp4A2  d.334.1.1 * 8e-86 31.5 %
:RPS:SCOP  390->568 2gp4A1  c.8.2.2 * 3e-34 31.1 %
:HMM:SCOP  5->389 2gp4A2 d.334.1.1 * 8.7e-134 50.8 %
:HMM:SCOP  390->568 2gp4A1 c.8.2.2 * 1.9e-58 57.4 %
:RPS:PFM   42->565 PF00920 * ILVD_EDD e-152 58.4 %
:HMM:PFM   42->565 PF00920 * ILVD_EDD 3.2e-220 54.1 519/521  
:BLT:SWISS 1->568 ILVD1_NOCFA 0.0 100.0 %
:PROS 130->140|PS00886|ILVD_EDD_1
:PROS 476->487|PS00887|ILVD_EDD_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56019.1 GT:GENE BAD56019.1 GT:PRODUCT putative phosphogluconate dehydratase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1300803..1302509 GB:FROM 1300803 GB:TO 1302509 GB:DIRECTION + GB:PRODUCT putative phosphogluconate dehydratase GB:PROTEIN_ID BAD56019.1 LENGTH 568 SQ:AASEQ MAEQTNTPDLKPRSRDVTDGLERTAARGMLRAVGMGDDDWEKPQIGVASSWNEITPCNLSLDRLAQGCKDGVFAAGGFPMQFGTISVSDGISMGHEGMHFSLVSREVIADSVETVMQAERLDGSVLLAGCDKSLPGMLMAAARLDLASVFLYAGSILPGIAKLSDGTEREVTIIDAFEAVGACARGLMSRADVDAIERAICPGEGACGGMYTANTMASAAEALGMSLPGSAAPPATDRRRDGYARRSGQAVVELLRRGITARDILTKEAFENAIAVVMAFGGSTNAVLHLLAIAHEARVELTLDDFARVGRRVPHLADVKPFGAHVMTDVDRIGGVPVMMKTLLDAGLLHGDCLTVTGRTVAENLAHIAPPDPDGKVVRALNDPIHPTGGITILSGSLAPGGAVVKSAGFDEDVFTGTARVFDRERAAMDALEDGTITAGDVVVIRYEGPKGGPGMREMLAITAAIKGAGLGKDVLLLTDGRFSGGTTGLCVGHVAPEAVDGGPIAFVRDGDRIRLDVAAGTLDLLVEPAELERRKQDWRPLPPRYTRGVLAKYTKLVGSASVGAVCD GT:EXON 1|1-568:0| SW:ID ILVD1_NOCFA SW:DE RecName: Full=Dihydroxy-acid dehydratase 1; Short=DAD 1; EC=4.2.1.9; SW:GN Name=ilvD1; OrderedLocusNames=NFA_11740; SW:KW 4Fe-4S; Amino-acid biosynthesis;Branched-chain amino acid biosynthesis; Complete proteome; Iron;Iron-sulfur; Lyase; Metal-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->568|ILVD1_NOCFA|0.0|100.0|568/568| GO:SWS:NREP 6 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0008652|"GO:cellular amino acid biosynthetic process"|Amino-acid biosynthesis| GO:SWS GO:0009082|"GO:branched chain family amino acid biosynthetic process"|Branched-chain amino acid biosynthesis| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| PROS 130->140|PS00886|ILVD_EDD_1|PDOC00690| PROS 476->487|PS00887|ILVD_EDD_2|PDOC00690| BL:PDB:NREP 1 BL:PDB:REP 89->535|2gp4A|1e-33|31.6|402/509| RP:PDB:NREP 2 RP:PDB:REP 35->301|2cwlB|1e-34|11.2|232/298| RP:PDB:REP 349->518|3ejfA|4e-27|14.7|150/166| RP:PFM:NREP 1 RP:PFM:REP 42->565|PF00920|e-152|58.4|519/521|ILVD_EDD| HM:PFM:NREP 1 HM:PFM:REP 42->565|PF00920|3.2e-220|54.1|519/521|ILVD_EDD| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00920|IPR000581| GO:PFM GO:0008152|"GO:metabolic process"|PF00920|IPR000581| RP:SCP:NREP 2 RP:SCP:REP 74->389|2gp4A2|8e-86|31.5|279/332|d.334.1.1| RP:SCP:REP 390->568|2gp4A1|3e-34|31.1|177/190|c.8.2.2| HM:SCP:REP 5->389|2gp4A2|8.7e-134|50.8|374/0|d.334.1.1|1/1|IlvD/EDD N-terminal domain-like| HM:SCP:REP 390->568|2gp4A1|1.9e-58|57.4|176/0|c.8.2.2|1/1|LeuD/IlvD-like| OP:NHOMO 1761 OP:NHOMOORG 913 OP:PATTERN 11-1--1111111111-11111111--11211111111111111111111211111-----1--1-11 2131211211111121111-121114111111211133332113242-211123111111121-23423211111111-11-211111111112---11--211211212---------------11111111111111111111111111111111111111111121111111111111111111111-11111111111111111121111111111111--1111111211111111111111111112---------------------1-111-------11111111111111-------------111222111-14-23111111111121112---2-1--1211122111111111111--12135444-22-2526771134543333333333225-33433537851-5554536666775522233423444342122222251122111-----------------------------2226222552746656452222557A222223447664512552325336463982211222212232222111311-2212111111111-1111111111111-3111111111112111111111111111222243323-2322322322233332222322-1-121111111122212314222422222-2232222222233223222222211123232323333323222322222221-22222222222211-------111122246111111-111111114444423111422222223322224333311-1-11-1121312222222123222222222222221111111111--------------------------------------1--1-111131 ------1-------134224464575622222222222222222222234334434333222111111111111111-1121111111-23242222222112222--4----------------------------------------------------------------1-1111I1111111342121132332 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 562 STR:RPRED 98.9 SQ:SECSTR ####HHHHHHHHTTTHHHHHHcTTTEEEccccccccccccccccccccHHHGccccccHHHHHHHGGGTTcTTcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccTTccHcccccccGGGcTTGGGGcccccHHHHTcccccccccTTHHcTTcccccGGGcccccTTcEEcccccGGGccccccHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHcccGGGGcccccccGGGcHHHHHTTEEEHHHTTTTcEEEEccccccTTGEEEEccccccccccccccGGHHHHHHHHHHTcGGGcHHHHHHHHTTccccEEEGcHHHHHHHHHHHTTcccccccccccccccccccccHHHcccccHHHHHHHHHHcHETHHHHHHHHHHHHHHccccEEEEccccTTEEEEEEEccccTTcccHHHHHHHHHHHHHHHTHTTccTTccEEEEEcccTTcTTccHHHHHHHHHHHHTTccEEEEEEGGGcHHHHTEEcccccccEEccHHHHHHHHHHHHTTccEEEEccGGGT## DISOP:02AL 1-4, 7-9| PSIPRED ccccccHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHcccEEEEEEcccccccccccHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHccccEEEEEccccccccccccccccEEEEEHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHccccEEEEEccccHHHHHHHHHHccHHHHHHHHHHcccccccccccccccHHHHHHHcccccccccEEccHHHHHcccccEEEEEcccccccEEEEEEcccccEEEEEEEEEccHHHHHHHHHccccccccEEEEcccccccccccHHHccccHHHHHccccccccEEEcccccccccccEEEEccHHHHccccEEEEEcccEEEEEccccEEEEEccHHHHHHHHHHccccccccccHHHHHHHHHcccHHHccccc //