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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56040.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  17/915 : Eukaryota  9/199 : Viruses  0/175   --->[See Alignment]
d.144.1
:390 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   150->385 3dxqB PDBj 1e-09 16.7 %
:RPS:SCOP  254->313 1nd4A  d.144.1.6 * 3e-04 20.0 %
:HMM:SCOP  146->345 1nd4A_ d.144.1.6 * 1.5e-09 22.7 %
:RPS:PFM   279->329 PF07914 * DUF1679 5e-04 41.2 %
:HMM:PFM   114->322 PF01636 * APH 6.8e-21 24.7 182/238  
:HMM:PFM   300->351 PF07007 * DUF1311 0.00047 25.0 52/95  
:PROS 322->329|PS00687|ALDEHYDE_DEHYDR_GLU

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56040.1 GT:GENE BAD56040.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1323455..1324627 GB:FROM 1323455 GB:TO 1324627 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56040.1 LENGTH 390 SQ:AASEQ MNHKLWLLGRSLTVGTRMLGEKITRPKARTIDDVPVSGETITPEWLTAVLCRDVPGAEAVSFETADGSVGTSTRVAIRVQYNETGAAAGLPTRLFAKTTTAFSQRILLGGGKMIDGETRFFRDFRPQVEMEAPIGYWGAADAGSWRSIALMEDIAATRGAQFIEPNARIGRDQMEDLVRNLARLHRTFWTHPDIAVLKTTTEALQAYLAAIDMKKRCAVGLRRAASVVPEALHGQSERLWAGVARAIDIATDEMPQTLLHGDPHIGQTYRTDTGRMGFVDWQVVMRGGWAHDFAYTVNSGCEPADRREWDRELLTAYLDELGELGGKAPSFDEAWLAYRQQSMFAYAAWAFTIGRAAYQPKMQSEETCLTLLRRITTAIDDHDSLGALGV GT:EXON 1|1-390:0| PROS 322->329|PS00687|ALDEHYDE_DEHYDR_GLU|PDOC00068| RP:PDB:NREP 1 RP:PDB:REP 150->385|3dxqB|1e-09|16.7|198/280| RP:PFM:NREP 1 RP:PFM:REP 279->329|PF07914|5e-04|41.2|51/409|DUF1679| HM:PFM:NREP 2 HM:PFM:REP 114->322|PF01636|6.8e-21|24.7|182/238|APH| HM:PFM:REP 300->351|PF07007|0.00047|25.0|52/95|DUF1311| RP:SCP:NREP 1 RP:SCP:REP 254->313|1nd4A|3e-04|20.0|60/255|d.144.1.6| HM:SCP:REP 146->345|1nd4A_|1.5e-09|22.7|176/255|d.144.1.6|1/1|Protein kinase-like (PK-like)| OP:NHOMO 50 OP:NHOMOORG 26 OP:PATTERN -------------------------------------------------------------------- ---------------31----3--12-----122321--1-1-2-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-3---------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------125242---12--1----------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 211 STR:RPRED 54.1 SQ:SECSTR #####################################################################################################################################################EEEccT###TcEEcHHHHHHcTTHHHHHHHHHHHHHTccccccccccHHH####HHHHHHHHTTccc##############cccTTHHHHHHHHHHHHHHHTcccccEEEcccccGGGEEEEEccccEEcccTTcEcEcHHHHHHHHHHHTTccHHHHHHHHHHHHHHTccccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccHHH####HHHHHHHHHHHHHcHH##### DISOP:02AL 1-2| PSIPRED cccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHccHHHHHHHHHccccccEEEEEEEcccccEEEEEEEEEEEEccccccccccEEEEEEcccccHHHHHHHcHHHHHHHHHHHHHHHHHccccccEEEEEEEccccccEEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccEEEEEEHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc //