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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56042.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  42/68 : Bacteria  701/915 : Eukaryota  189/199 : Viruses  1/175   --->[See Alignment]
b.35.1c.2.1
:371 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->366 1hdyA PDBj 7e-56 37.2 %
:RPS:PDB   1->367 1d1sA PDBj 2e-62 29.7 %
:RPS:SCOP  1->191 1f8fA1  b.35.1.2 * 3e-38 29.6 %
:RPS:SCOP  162->332 1v3tA2  c.2.1.1 * 8e-16 14.3 %
:HMM:SCOP  1->191 1dehA1 b.35.1.2 * 1.7e-70 49.7 %
:HMM:SCOP  157->333 1m6hA2 c.2.1.1 * 1.7e-39 34.3 %
:HMM:SCOP  321->368 1e3iA1 b.35.1.2 * 3e-10 52.1 %
:RPS:PFM   28->105 PF08240 * ADH_N 4e-16 47.4 %
:RPS:PFM   200->254 PF00107 * ADH_zinc_N 2e-04 44.4 %
:HMM:PFM   28->153 PF08240 * ADH_N 4.6e-32 41.9 105/109  
:HMM:PFM   195->318 PF00107 * ADH_zinc_N 3.5e-21 34.5 119/130  
:BLT:SWISS 1->366 ADHB_MYCTU 2e-84 41.8 %
:PROS 60->74|PS00059|ADH_ZINC
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56042.1 GT:GENE BAD56042.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1326190..1327305 GB:FROM 1326190 GB:TO 1327305 GB:DIRECTION + GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD56042.1 LENGTH 371 SQ:AASEQ MKTKAAVVRQAGKPIEIEELELDKPREGEVLIRYLYGGLCHSDVHIAHGDLEARLPMVLGHEGAGIIEEVGPGVTRVKPGDHVVCSFIPNCGTCRYCSSGQQSICDMGATILDGYLPGERFPITGPLGRYGAMCMLGTFSQYGVIHQNSCVKVDDDLPLDKAVLVGCGVPTGWGAAVNTAEVKAGQTVVVMGIGGIGINAVQGAALAGAKNVIAIDPLPNKREKAMELGATHAFASADEAMQTITDLTRGQMADSAILTPGLMTSEIVQGGFDAVGKGGVVVLTGLNKLEETTVQLSGSVMTLFRKQLRGSLFGDCNPTVDIPRILGLYQSGDLKLDELITKTYTLEQVNEGYDDLLNGKNVRGVLVHDHS GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 1->366|ADHB_MYCTU|2e-84|41.8|366/375| PROS 60->74|PS00059|ADH_ZINC|PDOC00058| SEG 192->198|giggigi| SEG 275->289|vgkggvvvltglnkl| BL:PDB:NREP 1 BL:PDB:REP 1->366|1hdyA|7e-56|37.2|355/374| RP:PDB:NREP 1 RP:PDB:REP 1->367|1d1sA|2e-62|29.7|364/373| RP:PFM:NREP 2 RP:PFM:REP 28->105|PF08240|4e-16|47.4|78/108|ADH_N| RP:PFM:REP 200->254|PF00107|2e-04|44.4|54/128|ADH_zinc_N| HM:PFM:NREP 2 HM:PFM:REP 28->153|PF08240|4.6e-32|41.9|105/109|ADH_N| HM:PFM:REP 195->318|PF00107|3.5e-21|34.5|119/130|ADH_zinc_N| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08240|IPR013154| GO:PFM GO:0008270|"GO:zinc ion binding"|PF00107|IPR013149| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00107|IPR013149| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00107|IPR013149| RP:SCP:NREP 2 RP:SCP:REP 1->191|1f8fA1|3e-38|29.6|186/188|b.35.1.2| RP:SCP:REP 162->332|1v3tA2|8e-16|14.3|168/182|c.2.1.1| HM:SCP:REP 1->191|1dehA1|1.7e-70|49.7|191/0|b.35.1.2|1/1|GroES-like| HM:SCP:REP 157->333|1m6hA2|1.7e-39|34.3|172/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 321->368|1e3iA1|3e-10|52.1|48/227|b.35.1.2|2/2|GroES-like| OP:NHOMO 4760 OP:NHOMOORG 933 OP:PATTERN 112-1-35BAAB9CD71532221-91113352------------1---1-231----1-1-2121-45 67C-C31744711269977-7F11BQ777778FIJJCIOL2A57C2541212DAC634112283B4HGBB51111121---1A111-1--12-1-----1-3-4-62411---------------------1----14421---283337112--11---12-111355A11----1------44233431828333333542454335865555333231272133333234133333323433334123341-4--3-6---445521212236222322122211111111111111222122222222222222122222--13221222221264--1-1---21-1-1--11214121-21113--15267445-----5599D5169635544554553444-84337546537-CCC6FFFDBCCF4525263453676344444444437641132------------------------------2A53212214BAAAACB9798BB9CAAAA378B94776--33943354534254433-1--3122322323135213-----1---1----34311212-438679121----111111-112111-1-----33221153328512222213232222322222---22--------36352258668888888-698877686868788788476656232647366866865653584334426--222332233333---3111113222212982225-3--111-11-22324-42219185883946568664677211212111-1222-----2211145755553444222---3112222--------1--------31--1-------21-------11-12111142 ----726-21--145KLFFJLPINTPNAA6878676AA88778976GDEMGKfUBEBA987874836344254576856745555584-DKBL6G4G7B792975B-333K67479454265829A5J3IpA-C7H7444523744441339394B38D66516543648867323542G11244CHZaGKL43FB7C3 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 371 STR:RPRED 100.0 SQ:SECSTR EEEEEEEccccccccEEEEEEEccccTTEEEEEEEEEEccHHHHHHHHTccccccccccccEEEEEEEEEcTTcccccTTcEEEEcccccccccHHHHcTTccccTTcccccccccTTccccEEETTEEEcccTTTcccccEEEEEGGGEEEccTTccTTTGGGGGTHHHHHHHHHHTTccccTTcEEEEEcccHHHHHHHHHHHHHTccEEEEEcccGGGHHHHHHHTccEEEcGGcccHHHHHHHHHTccccEEEEccccHHHHHHHHHHHTHccTTTcEEEEcccccTTccccccTHHHHTTcEEEEccGGGccHHHHHHHHHHHHTTTccccGGGEEEEEEGGGHHHHHHHHTTTcccEEEEETTcc PSIPRED ccEEEEEEEEccccEEEEEEEcccccccEEEEEEEEEEEcccEEEEEEccccccccEEccccccEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccccccccccccccEEccccccccccEEccccHHEEEEEcHHHEEEccccccHHHcEEcccHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccEEEcccccHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHccccEEEEEcccccccccccccHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHccccccccEEEEEEEHHHHHHHHHHHHcccccEEEEEEccc //