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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56043.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  49/68 : Bacteria  497/915 : Eukaryota  41/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:308 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->239 2r44A PDBj 2e-06 27.3 %
:RPS:PDB   19->59 2c9oB PDBj 5e-05 31.7 %
:RPS:PDB   35->294 1e2jA PDBj 9e-10 11.5 %
:RPS:SCOP  27->59 2gnoA2  c.37.1.20 * 4e-05 9.1 %
:RPS:SCOP  38->139 1s9hA  c.37.1.20 * 1e-10 18.4 %
:HMM:SCOP  19->284 1ksfX3 c.37.1.20 * 2e-32 29.4 %
:RPS:PFM   41->177 PF07728 * AAA_5 2e-12 38.3 %
:HMM:PFM   40->178 PF07728 * AAA_5 1.7e-28 33.3 132/139  
:BLT:SWISS 28->59 UGPC_RHIME 7e-04 56.2 %
:BLT:SWISS 40->239 Y979_STAEQ 2e-19 31.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56043.1 GT:GENE BAD56043.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1327302..1328228 GB:FROM 1327302 GB:TO 1328228 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56043.1 LENGTH 308 SQ:AASEQ MTLTDGCATSAGGALAPADVVVDRAREIQLVEAALASGAHVVLEGPPGTGKSTLLRDLAVRRASSFVLVEGNAELTPARIVGQFDPAQVLQRGYDPAIFVDGPLLTAMREGGLFYVEEINRVPEETLNTLITVMSEREIAVPRLGTIAAAPGFALVAAMNPFDAVGTARISSAVHDRMCRVAMDYQSAEAEQTIVARRAPRVSDEWRSRAVELVRATRSHPDLRVGSSVRGAIDLVGVAHHLAAARGAPTADWHVGLDAARVALSGRVQVHRSAGRTAEDVIEEIYTAVFGPAPDTPEPSEAGGPGER GT:EXON 1|1-308:0| BL:SWS:NREP 2 BL:SWS:REP 28->59|UGPC_RHIME|7e-04|56.2|32/349| BL:SWS:REP 40->239|Y979_STAEQ|2e-19|31.0|197/263| BL:PDB:NREP 1 BL:PDB:REP 21->239|2r44A|2e-06|27.3|205/320| RP:PDB:NREP 2 RP:PDB:REP 19->59|2c9oB|5e-05|31.7|41/393| RP:PDB:REP 35->294|1e2jA|9e-10|11.5|260/306| RP:PFM:NREP 1 RP:PFM:REP 41->177|PF07728|2e-12|38.3|128/135|AAA_5| HM:PFM:NREP 1 HM:PFM:REP 40->178|PF07728|1.7e-28|33.3|132/139|AAA_5| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF07728|IPR011704| GO:PFM GO:0016887|"GO:ATPase activity"|PF07728|IPR011704| RP:SCP:NREP 2 RP:SCP:REP 27->59|2gnoA2|4e-05|9.1|33/198|c.37.1.20| RP:SCP:REP 38->139|1s9hA|1e-10|18.4|98/268|c.37.1.20| HM:SCP:REP 19->284|1ksfX3|2e-32|29.4|248/319|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1218 OP:NHOMOORG 587 OP:PATTERN 223122----------2221---164374721111---1111--22212124313322121-111122 -1325---------46644-471144444444588863442648434132215341-2--674252346531111111----2112112231-111---11213232323--------------1-11111-121154446---6151121111111--1---121-2223------------312--231312444443442443434-2222254212221341111115411111111111111111111----1----------11-----------------------------------------------------2-1-1----------2-------3222-321-1--1-1112--2222--151E-22-----1-22621112221311111111111-2222212--11--1111-2---111111242423222-2--------2--1111-------------------------------11-1--1-11---1-----------------2-12321--11-43222342134113442211-------2113323412--12-1-11-1222322224----57-1--------------------1112333222242412242322232233321235222---13-4-------------1111111111-111121111-111111111-------1-----------------1--11-------------------2-----1111226-1----------------------11-2144441322311114323---------313321111112211443333322211111112221111--------2---------------------------21-1111111123 ---1---------1---1---------11-----11----------11--------------1-------1------------------12--1--------111---111-11-----1--------------------------------------111--------11-1-1---15-11-----2-11--3111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 290 STR:RPRED 94.2 SQ:SECSTR #############cccHHcHHHHHHHHHHHHHHHccEEEEEEEcccTTccHHHHHHHcccccEEEcccHHHHHTTccccHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEEEcccccccEEEEEEccTHHHHHHHHHTTcccHHHHHHHHHHcccccTTcEEEEEEccHHHHHHHHHHcccTTccccHHHHHHHTTccHHHHGGGGGcccccGGGcGGGGGccGGcTTccccHHHHHHHHHHHHHHHTcEEEEEEccccHHHHHHHHHHHGGGcccEEEccTTHH##### DISOP:02AL 296-308| PSIPRED ccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHccHHHHHHHccccccEEEEccHHHHHcccccEEEEEccccccHHHHHHHHHHHcccEEEEccccEEEccccEEEEEEEccccccccccccHHHHccEEEEEcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccEEccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccHHHcccHHHHHHHHHHHcccccccccccccccccccc //