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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56051.1
DDBJ      :             putative amidase
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  764/915 : Eukaryota  186/199 : Viruses  0/175   --->[See Alignment]
c.117.1
:472 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->452 2dqnA PDBj 6e-63 37.8 %
:RPS:PDB   1->463 2dqnA PDBj 3e-97 32.7 %
:RPS:SCOP  1->463 2df4A1  c.117.1.1 * 4e-98 32.7 %
:HMM:SCOP  1->463 2f2aA1 c.117.1.1 * 2.9e-142 43.9 %
:RPS:PFM   25->444 PF01425 * Amidase 3e-68 43.0 %
:HMM:PFM   24->444 PF01425 * Amidase 1.5e-135 41.8 421/435  
:BLT:SWISS 6->464 AMID_PSEPU e-113 52.4 %
:PROS 147->178|PS00571|AMIDASES
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56051.1 GT:GENE BAD56051.1 GT:PRODUCT putative amidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1336750..1338168 GB:FROM 1336750 GB:TO 1338168 GB:DIRECTION + GB:PRODUCT putative amidase GB:PROTEIN_ID BAD56051.1 LENGTH 472 SQ:AASEQ MRPCDLTLSEASEEIAAGRLSPVELTESVLDQVARHEPVIGAFSVVTAEAATVQAARAAEEIAAGRRRGPLHGIPIGVKALVNRAGVETTSSSRSRAGHVPEDDAAVVERLDRAGAVLVGQTHTHEFAYGVVTPTTRNPWHPDHIPGGSSGGSGAALAARMVLGAIGTDTGGSIRIPSALCGVTGIKPTYGRVSRYGTTSLSWSLDHIGPMGRTVADNALLLGELAGFDPRDPATVDAEVPDYRASLVADVRGMTVGVPTNYFFDHIDPEVEAAYRAAVHVLADAGAHVREVALPLPEQYMPVEYAVFVAEASAYHQEALRERADRYEADVRLMLEAGEMVLATDYIRALRARTLLQQGWREMFDGLDAVLAPTVPRAAAPAGQGEFTWPDGMSEPLINAYVRTCAPGNLTGLPAMSVPCGFTATGLPIGMQIIGKPFDEATVLRVGHTYESATDWTRRAPDLIADVSEAGV GT:EXON 1|1-472:0| BL:SWS:NREP 1 BL:SWS:REP 6->464|AMID_PSEPU|e-113|52.4|456/466| PROS 147->178|PS00571|AMIDASES|PDOC00494| SEG 48->68|aeaatvqaaraaeeiaagrrr| SEG 147->159|ggssggsgaalaa| BL:PDB:NREP 1 BL:PDB:REP 19->452|2dqnA|6e-63|37.8|426/485| RP:PDB:NREP 1 RP:PDB:REP 1->463|2dqnA|3e-97|32.7|455/485| RP:PFM:NREP 1 RP:PFM:REP 25->444|PF01425|3e-68|43.0|416/425|Amidase| HM:PFM:NREP 1 HM:PFM:REP 24->444|PF01425|1.5e-135|41.8|421/435|Amidase| GO:PFM:NREP 1 GO:PFM GO:0016884|"GO:carbon-nitrogen ligase activity, with glutamine as amido-N-donor"|PF01425|IPR000120| RP:SCP:NREP 1 RP:SCP:REP 1->463|2df4A1|4e-98|32.7|455/485|c.117.1.1| HM:SCP:REP 1->463|2f2aA1|2.9e-142|43.9|456/0|c.117.1.1|1/1|Amidase signature (AS) enzymes| OP:NHOMO 3149 OP:NHOMOORG 1002 OP:PATTERN 11-1--2433333332--111112211111231111111111111111111111-----------111 36C3422422322274455-53118E55555677678ECC25242231144143422211355226A44231111111-111511111--------1------112113111111111-11111111111111111444331111523222232211111211121334531211111211114342211151133333233133333321322133322123122222113711111111111111111111212122121111111221111131212221222111111111111111111111111111111111111211-2111111111111-111---11211111112211111211111111171155571111122JLM224E6AF444554542436188A7476D5A81C44A55567664K91724455455356545555557442222211111111111111111111111111111235C11AFEB9B7BABD5777788FC77784AA9D7CH8143324664474B3A8441111111111111111214414341122111111111111112144345822111111111111111111111211122--2232-1312-------1------1---2--11232------1132--2---1-11----------------------113121-1-----------------4----------11111111111----11111333325427---------------444441212213434328472244228791111111112--------------1132222-------11111111221111111111-----1-11111111111111111111112112111221 11--221-1-----2BBJ7AEDDAEBC998889A889A8A79B788738EFEKJ37B5465653324452223273223324442422-9A6B4543335313222-244K232121111-22134-32382-2261111312521212121141444224127211632732611343L24358B8AID6A2122222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 468 STR:RPRED 99.2 SQ:SECSTR cTTTTccHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHccEEEEcHHHHHHHHHHHHHHHHTTcccccccccEEEEETTcccTTccccTTcGGGTTcccccccHHHHHHHHTTcEEEEEEcccGGGccccccccccTTcTTcccccccHHHHHHHHTTcccEEEEEccccTTHHHHHHHTcEEEEccTTccccTTcccccTTTccEEEEEccHHHHHHHHHHHccccTTcTTccccccccccTTTTcccTTcEEEEEGGGGcTTccHHHHHHHHHHHHHHHHTTcEEEEEccGGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcTTHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccTTcccccTTTcTTcHHHHHTTTTTHHHHHHTccEEEEEEEEHETTEEEEEEEEccTTcHHHHHHHHHHHHHHcccTTTGGGcccEEE#### DISOP:02AL 468-469, 471-472| PSIPRED cccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHHHHHHHHHHccccccHHcccEEEEEcccccccccccccHHHccccccccHHHHHHHHHcccEEEEcccccHHHcccccccccccccccccccccccHHHHHHHHHHHHEEEcccccccccccHHHcccEEEccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccHHHHHHccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccEEEEEEEcccccHHHHHHHHHHHHHHHcccccccccccccccccc //