Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56059.1
DDBJ : putative ferredoxin
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 148/915 : Eukaryota 61/199 : Viruses 0/175 --->[See Alignment]
d.15.4




















:108 amino acids
















:SECSTR
















:PSIPRED


:BLT:PDB 3->107 1gpxA PDBj 3e-21 45.2 %

:RPS:PDB 1->104 1e6eB PDBj 7e-11 29.4 %


:RPS:SCOP 2->107 1doiA d.15.4.1 * 1e-09 20.8 %

:HMM:SCOP 2->108 1xlqA1 d.15.4.1 * 7.4e-26 39.6 %


:HMM:PFM 8->89 PF00111 * Fer2 4.9e-15 40.3 67/77
:BLT:SWISS 1->108 THCC_RHOER 2e-25 49.5 %


:PROS 40->50|PS00814|ADX
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56059.1
GT:GENE BAD56059.1
GT:PRODUCT putative ferredoxin
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION 1344471..1344797
GB:FROM 1344471
GB:TO 1344797
GB:DIRECTION +
GB:PRODUCT putative ferredoxin
GB:PROTEIN_ID BAD56059.1
LENGTH 108
SQ:AASEQ MPKVTYHHPDGTDTVVDADAGSTVMHAAVRNGVPGIVGECGGQAMCATCHVYVREPFLSRFAPISDDEEEMLDCTAAPRDERRSRLGCQLSLPADLAEVEVEVPDAQI
GT:EXON 1|1-108:0|
BL:SWS:NREP 1
BL:SWS:REP 1->108|THCC_RHOER|2e-25|49.5|107/107|
PROS 40->50|PS00814|ADX|PDOC00642|
BL:PDB:NREP 1
BL:PDB:REP 3->107|1gpxA|3e-21|45.2|104/106|
RP:PDB:NREP 1
RP:PDB:REP 1->104|1e6eB|7e-11|29.4|102/113|
HM:PFM:NREP 1
HM:PFM:REP 8->89|PF00111|4.9e-15|40.3|67/77|Fer2|
RP:SCP:NREP 1
RP:SCP:REP 2->107|1doiA|1e-09|20.8|96/128|d.15.4.1|
HM:SCP:REP 2->108|1xlqA1|7.4e-26|39.6|106/0|d.15.4.1|1/1|2Fe-2S ferredoxin-like|
OP:NHOMO 277
OP:NHOMOORG 209
OP:PATTERN -------------------------------------------------------------------- -------1111---2------1--1--------1112225------1-------1-------1--1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----112221111112111111111111-11111211114-111111211111111111121111112111111111111211111-1111111--111111111111111111-261--1-------1---------1--------2--------------1-31----------------------1----------------------------------------------------------------1--11-1-----------------------------------11-----------------------------------11-------------------------------------------------------1---------------------------------------------------------------------------1-------------------------------------------------------------------- 11--11--511-111-----------------------------------------------------------------------------------------------2211-1211-112121221252-213-21-2-221-2-1-1--3--------1212-1122----1--18------11-----21111- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 108
STR:RPRED 100.0
SQ:SECSTR cEEEEEEcTTccEEEEEEcTTccHHHHHHHTTccTTccTTcccccccTTEEEccHHHHTTcccccHHHHHHHTTcccccccTTEEEGGGccccGGGTTEEEEccGcGc
PSIPRED ccEEEEEcccccEEEEEEcccccHHHHHHHccccccccccccccEEEEEEEEEcccHHcccccccHHHHHHHHHHHccccccccEEEEEEEEccccccEEEEcccccc
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