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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56059.1
DDBJ      :             putative ferredoxin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  148/915 : Eukaryota  61/199 : Viruses  0/175   --->[See Alignment]
d.15.4
:108 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->107 1gpxA PDBj 3e-21 45.2 %
:RPS:PDB   1->104 1e6eB PDBj 7e-11 29.4 %
:RPS:SCOP  2->107 1doiA  d.15.4.1 * 1e-09 20.8 %
:HMM:SCOP  2->108 1xlqA1 d.15.4.1 * 7.4e-26 39.6 %
:HMM:PFM   8->89 PF00111 * Fer2 4.9e-15 40.3 67/77  
:BLT:SWISS 1->108 THCC_RHOER 2e-25 49.5 %
:PROS 40->50|PS00814|ADX

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56059.1 GT:GENE BAD56059.1 GT:PRODUCT putative ferredoxin GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1344471..1344797 GB:FROM 1344471 GB:TO 1344797 GB:DIRECTION + GB:PRODUCT putative ferredoxin GB:PROTEIN_ID BAD56059.1 LENGTH 108 SQ:AASEQ MPKVTYHHPDGTDTVVDADAGSTVMHAAVRNGVPGIVGECGGQAMCATCHVYVREPFLSRFAPISDDEEEMLDCTAAPRDERRSRLGCQLSLPADLAEVEVEVPDAQI GT:EXON 1|1-108:0| BL:SWS:NREP 1 BL:SWS:REP 1->108|THCC_RHOER|2e-25|49.5|107/107| PROS 40->50|PS00814|ADX|PDOC00642| BL:PDB:NREP 1 BL:PDB:REP 3->107|1gpxA|3e-21|45.2|104/106| RP:PDB:NREP 1 RP:PDB:REP 1->104|1e6eB|7e-11|29.4|102/113| HM:PFM:NREP 1 HM:PFM:REP 8->89|PF00111|4.9e-15|40.3|67/77|Fer2| RP:SCP:NREP 1 RP:SCP:REP 2->107|1doiA|1e-09|20.8|96/128|d.15.4.1| HM:SCP:REP 2->108|1xlqA1|7.4e-26|39.6|106/0|d.15.4.1|1/1|2Fe-2S ferredoxin-like| OP:NHOMO 277 OP:NHOMOORG 209 OP:PATTERN -------------------------------------------------------------------- -------1111---2------1--1--------1112225------1-------1-------1--1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-----112221111112111111111111-11111211114-111111211111111111121111112111111111111211111-1111111--111111111111111111-261--1-------1---------1--------2--------------1-31----------------------1----------------------------------------------------------------1--11-1-----------------------------------11-----------------------------------11-------------------------------------------------------1---------------------------------------------------------------------------1-------------------------------------------------------------------- 11--11--511-111-----------------------------------------------------------------------------------------------2211-1211-112121221252-213-21-2-221-2-1-1--3--------1212-1122----1--18------11-----21111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 108 STR:RPRED 100.0 SQ:SECSTR cEEEEEEcTTccEEEEEEcTTccHHHHHHHTTccTTccTTcccccccTTEEEccHHHHTTcccccHHHHHHHTTcccccccTTEEEGGGccccGGGTTEEEEccGcGc PSIPRED ccEEEEEcccccEEEEEEcccccHHHHHHHccccccccccccccEEEEEEEEEcccHHcccccccHHHHHHHHHHHccccccccEEEEEEEEccccccEEEEcccccc //