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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56065.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  218/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:171 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->167 1rz0A PDBj 3e-12 33.8 %
:RPS:PDB   16->166 2d38A PDBj 1e-28 23.3 %
:RPS:SCOP  14->167 1rz0A  b.45.1.2 * 1e-39 34.5 %
:HMM:SCOP  10->173 1uscA_ b.45.1.2 * 8.1e-50 42.3 %
:RPS:PFM   26->160 PF01613 * Flavin_Reduct 1e-13 34.8 %
:HMM:PFM   24->162 PF01613 * Flavin_Reduct 2.5e-34 36.7 139/155  
:BLT:SWISS 11->160 NTAB_CHEHE 6e-26 40.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56065.1 GT:GENE BAD56065.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1352482..1352997 GB:FROM 1352482 GB:TO 1352997 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD56065.1 LENGTH 171 SQ:AASEQ MTTVEPRPLLPADDLRAYRRSLGCFPTGITVMTAAHAGVRVGVTANSFASVSLEPPLVLWALRTDSPSLPVFRDSGHFAVNVLAWHQEELSRRFATPAEDKFAGLDIGEGLGGAPLLGGCAARFETRIAHRITSGDHVLLVGEVVRYNNFHREPLIFLRGDHRWLGQPLVD GT:EXON 1|1-171:0| BL:SWS:NREP 1 BL:SWS:REP 11->160|NTAB_CHEHE|6e-26|40.0|150/322| SEG 108->122|geglggapllggcaa| BL:PDB:NREP 1 BL:PDB:REP 20->167|1rz0A|3e-12|33.8|139/147| RP:PDB:NREP 1 RP:PDB:REP 16->166|2d38A|1e-28|23.3|150/156| RP:PFM:NREP 1 RP:PFM:REP 26->160|PF01613|1e-13|34.8|135/150|Flavin_Reduct| HM:PFM:NREP 1 HM:PFM:REP 24->162|PF01613|2.5e-34|36.7|139/155|Flavin_Reduct| RP:SCP:NREP 1 RP:SCP:REP 14->167|1rz0A|1e-39|34.5|148/153|b.45.1.2| HM:SCP:REP 10->173|1uscA_|8.1e-50|42.3|163/178|b.45.1.2|1/1|FMN-binding split barrel| OP:NHOMO 441 OP:NHOMOORG 223 OP:PATTERN ------11-------1-1-------------------------------------------------- --1-5--1112---22233-33--43332333533373ED-4331--1----44--11--332-5123441-----------2-----------------------------------------------------23311---11---------------1--1------------------11-11---2-----------------1---------1211--------------------------------------------------------------------------------------------------------------------------------1---------------------1--211--------2-111-1--1-------------11-11---1-1-244421211243142211112121222-------------11111-1-111----1111111111111------3-1-3111123333321111331122112142225421111211111211131111-----------------42-----------------------------1--------------------------------------1--------1------1---------------------------------------------------------------------------------------------------------------------2---------------33323-4---1---1-4123234331111------------------------11----------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 171 STR:RPRED 100.0 SQ:SECSTR HHTTTcccccccccGHHHHHHHTTccEEcEEEEEEETTEEEEEEEcccEEEETTTTEEEEEEETTTTTTHHHHTccEEEEEEEccHHHHHHHHHcccGGGGGGcccEEEcGGGcEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEcccccccEEEETTEEEEcTccccc DISOP:02AL 1-11, 166-167, 170-171| PSIPRED ccccccccccccccHHHHHHHHHHHcccEEEEEEccccEEEEEEEEEEEEEEccccEEEEEEcccccHHHHHHHccEEEEEEccHHHHHHHHHHcccccccccccccEEccccccEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEEcccccEEEEccccccccccccc //