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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56076.1
DDBJ      :             putative CoA-transferase
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  373/915 : Eukaryota  155/199 : Viruses  0/175   --->[See Alignment]
c.123.1
:380 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->380 2vjqA PDBj 8e-41 33.2 %
:RPS:PDB   78->230 2c9eA PDBj 2e-31 15.0 %
:RPS:SCOP  3->380 1xa3A  c.123.1.1 * 3e-95 24.5 %
:HMM:SCOP  3->380 1q7eA_ c.123.1.1 * 4.6e-129 49.3 %
:RPS:PFM   70->258 PF02515 * CoA_transf_3 1e-43 51.3 %
:HMM:PFM   70->255 PF02515 * CoA_transf_3 6.1e-69 48.9 186/191  
:BLT:SWISS 6->379 YFDE_ECOLI 1e-73 38.2 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56076.1 GT:GENE BAD56076.1 GT:PRODUCT putative CoA-transferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1368478..1369620 GB:FROM 1368478 GB:TO 1369620 GB:DIRECTION + GB:PRODUCT putative CoA-transferase GB:PROTEIN_ID BAD56076.1 LENGTH 380 SQ:AASEQ MNALPPLDGVRVVDLSRVLAGPYCTALLADAGADVVKIETKAGEDARHLGPFRDGESLYFTVLNRGKRSVALDLKDPADRDALLELIAGADVVVENFRPGVTTRLGIDYAAARARNPRLVYASISGFGQQGPMSGAAAYDLVVQALSGIMSITGSPESGPTRLGESFGDLIAGLFAAWGISTALLAARTTGQGQHLDVAMFDSMLAMLPTAHSQLQATGAAPGRVGNRHPVSTPFDTYRADDGLFVLAVASQSGFEKLARTLGRGDLITDPRFADDTARTVNEPVLRKEIENWAAGRTVAQVVAILTAAGLAASPVWDVAQALDSEQARSRGVVQSFEHPVAGTVSYVRQPVVFGGSARPPVRRSPLLDEHHEEVLAEFG GT:EXON 1|1-380:0| BL:SWS:NREP 1 BL:SWS:REP 6->379|YFDE_ECOLI|1e-73|38.2|369/381| TM:NTM 1 TM:REGION 295->317| BL:PDB:NREP 1 BL:PDB:REP 6->380|2vjqA|8e-41|33.2|367/427| RP:PDB:NREP 1 RP:PDB:REP 78->230|2c9eA|2e-31|15.0|153/317| RP:PFM:NREP 1 RP:PFM:REP 70->258|PF02515|1e-43|51.3|189/189|CoA_transf_3| HM:PFM:NREP 1 HM:PFM:REP 70->255|PF02515|6.1e-69|48.9|186/191|CoA_transf_3| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02515|IPR003673| GO:PFM GO:0008152|"GO:metabolic process"|PF02515|IPR003673| RP:SCP:NREP 1 RP:SCP:REP 3->380|1xa3A|3e-95|24.5|371/400|c.123.1.1| HM:SCP:REP 3->380|1q7eA_|4.6e-129|49.3|377/417|c.123.1.1|1/1|CoA-transferase family III (CaiB/BaiF)| OP:NHOMO 2611 OP:NHOMOORG 551 OP:PATTERN --1----232523322-11421-51--12-32-----------------------------1-2---- --2351-1---1-16UI44-4G--DS444449FEJF5IRl-N3Y1--2----442222--12B123C6635-111----1616------------------2------12--------------------------66686---32----------------------------------------22---11----------------1--------22323--------1----------------------2------2-1--11--------------------------------------------------------12--2222222-2--3-------1---1----87-1----1--------2--633A-----2-KBD--7B59A633442443442-34A33E39855-41111222133296472759222426722222222511--723------------------------------57F6-5uaHfEDDFIF5577799GE887858V7TRclc2678574898N8IAPT456----21-------1-1922-121-----2------2--3----111111-6---------------------------1---1-4-3--1------1----1-11-1--------------1-2-3--3333333333-2333333333233223221------111111111111111111122333321-----------------111111111-2212---------------44324242222155553656342455223------------------------------------------111111------------------------------------------------- ----111-----1126574655378773322222225666466333334768DA667124333-1---------1------111-1---45454353111213432-2-23252222112222223251AV3-633222231222212222215-532823212222232A1222-11-----111--83---111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 375 STR:RPRED 98.7 SQ:SECSTR #####TTTTcEEEEcccccHHHHHHHHHHHTTcEEEEEEETTTccGGGcGcccccccHHHHTTcTTcEEEEEcTTcHHHHHHHHHHHHHHHHHHTTccTTcccHHHHHHHHHHHHcHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHTTcTTccccHHHHHHHHHHHHHHHHTccHHHHHHGGGTcTTHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHccccccGGGTTTcTTcEEEEEccGGGHHHHHHHHTcGHHTTcGGGcccTTTccHHHHTTTHHHHTTTTccHHHHHHHHHHTTccEEEcccHHHHHTcHHHHHTTcEEEEccTTTccEEEEcccccccccccccccccccTTTTHHHHHHHTT DISOP:02AL 1-3| PSIPRED ccccccccccEEEHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHccEEEEcccHHHHHHHcccHHHHHHHcccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEcccccEEEEEcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccEEEcccHHHHHcccHHHHccEEEEEEcccccEEEEccccccccccccccccccccccccHHHHHHHcc //