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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56083.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  125/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.8.8
:254 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->249 1r61A PDBj 2e-14 33.5 %
:RPS:PDB   18->253 2b0aA PDBj 3e-28 21.6 %
:RPS:SCOP  15->251 1r61A  c.8.8.1 * 5e-40 28.6 %
:HMM:SCOP  15->253 1r61A_ c.8.8.1 * 4.5e-53 39.5 %
:RPS:PFM   44->186 PF04199 * Cyclase 2e-08 34.1 %
:HMM:PFM   19->191 PF04199 * Cyclase 1.2e-31 32.5 163/171  
:BLT:SWISS 64->249 KYNB_SALRD 2e-06 32.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56083.1 GT:GENE BAD56083.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1378006..1378770) GB:FROM 1378006 GB:TO 1378770 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56083.1 LENGTH 254 SQ:AASEQ MMSVLSTVVEATRSGAVEIIDLTTPLQESTPILQLPPPLANTVPFRLEEISRYDDRGPAWYWNNIHTGEHTGTHLDAPVHWVTGRDGHDVSQAPLQTLVAPAAVVDLTAQVADDPDFLLEVAHLEAWEQEHGPLPEGGWLLYRTGWAARGADAAAFTNDGHTPGVSVECARWLAEKSPLAGFGVETVGTDAGAAPGFDPAFPCHSLLLGANKWGLTSLRNLDKLPATGALLIVSPLPIVGGSGSPARVLALVER GT:EXON 1|1-254:0| BL:SWS:NREP 1 BL:SWS:REP 64->249|KYNB_SALRD|2e-06|32.1|162/212| SEG 147->155|aargadaaa| SEG 190->202|dagaapgfdpafp| BL:PDB:NREP 1 BL:PDB:REP 16->249|1r61A|2e-14|33.5|197/205| RP:PDB:NREP 1 RP:PDB:REP 18->253|2b0aA|3e-28|21.6|185/186| RP:PFM:NREP 1 RP:PFM:REP 44->186|PF04199|2e-08|34.1|138/162|Cyclase| HM:PFM:NREP 1 HM:PFM:REP 19->191|PF04199|1.2e-31|32.5|163/171|Cyclase| RP:SCP:NREP 1 RP:SCP:REP 15->251|1r61A|5e-40|28.6|203/205|c.8.8.1| HM:SCP:REP 15->253|1r61A_|4.5e-53|39.5|205/0|c.8.8.1|1/1|Putative cyclase| OP:NHOMO 174 OP:NHOMOORG 136 OP:PATTERN ------1---------1-----1-------------------------------------1-1---11 -11-1---111--------------1----------2321---1--------1-1------2-------------------11-----------------------------------------1--1--------12212----3---111------------1--111--------------------------------------------------21---------1--1111111111111111111-------------11------2-----------111------------------------111111111---------------------------1------------------1------1---------1-1-1------------------1---1--1---1---11---1---11------2-11111-3---------------1--------------------------------1--------------------------------1------1---------221-------------------2--11--1-1-11111----1-1--------2-1---------1--------------------------------------------------1-------------------------------------------------1112------------------------------------------------1112--1----------------1---------------------------------------------------------------------------------------------------------------------------1-- ----------------------------------------------------------------------------------------------1---------------G-----------------------------------------------------2--------2------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 228 STR:RPRED 89.8 SQ:SECSTR ###############cccEEEccccccccccTTcccccEEEEEEETTEEEEEEEETT##EEEEEEEccTTcccEEEcGGGGTccc#ccTccccGGGcEEEEEEEEEcTT##cccEEcHHHHTTEETTTccccccccccEEEEEccGGGGTTcGGGGGc#####ccccTTHHHHHHcccccEEEEcccccccHHcccccTTcHHHHHHHHTTcEEEEcccGGGGGcTcEEEEEEEEcccccccEEEEEEEEEEc# DISOP:02AL 1-5| PSIPRED cHHHHHHHHHHHHHccEEEEEccEEEccccccccccccccEEEEEEEEccccccccccEEEEEEEEEcccccHHHccHHHHcccccccccccccHHHEEEcEEEEEEccccccccccEEcHHHHHHHHHHccccccccEEEEEccHHHHccccHHHHcccccccccHHHHHHHHHcccEEEEEEEEEccccccccccccccHHHHHHHHcccEEEEEEccHHHcccccEEEEEccccccccccccEEEEEEEEc //