[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56088.1
DDBJ      :             putative acyl-CoA synthetase
Swiss-Prot:             

Homologs  Archaea  53/68 : Bacteria  727/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
e.23.1
:536 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   204->530 2v7bA PDBj 2e-53 38.8 %
:RPS:PDB   38->534 3e7wA PDBj 7e-59 14.8 %
:RPS:SCOP  22->531 1md9A  e.23.1.1 * 1e-62 21.8 %
:HMM:SCOP  27->535 1pg4A_ e.23.1.1 * 3.2e-139 39.4 %
:RPS:PFM   67->459 PF00501 * AMP-binding 2e-40 37.4 %
:HMM:PFM   67->460 PF00501 * AMP-binding 3.8e-85 35.5 391/418  
:BLT:SWISS 30->529 BCLA_THAAR 5e-60 31.2 %
:PROS 194->205|PS00455|AMP_BINDING
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56088.1 GT:GENE BAD56088.1 GT:PRODUCT putative acyl-CoA synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1382484..1384094 GB:FROM 1382484 GB:TO 1384094 GB:DIRECTION + GB:PRODUCT putative acyl-CoA synthetase GB:PROTEIN_ID BAD56088.1 LENGTH 536 SQ:AASEQ MLTPSAHIDTFCRDNLPPPSQWPEFVFDLPALRYPERLNCASALLDGAVDRHGRDRPCLSTAESTWSYGDLLDTANRIARVLTEDFGLVPGNRVLLRSPNTPWLVACWFAVVKAGGVVVTTMPLLRAAELTKLIDLTRPALALCDHRLTAELACADLPVVPVGGPGAEDLTRRAAAKPPTFTDVATAADDVVLLAPTSGTTGTPKATMHFHRDVLAVADTFGAHVLRPRPDDVFIGTPPLAFTFGLGGLVIFPLRVGASTVLLERADPESLVVAIEKFAATVLFTAPTAYKALLKRDDLDGLRTLRRCVSAGEHLPEPVFTGFRERTGISIVNGIGGTELLHIYISAADADIRPGSLGRAVPGFQVEIQDDDGNPVPDGTAGLLAVKGPTGCRYLADPRQRDYVRGGWNLTGDTCTRDADGYLWYHARSDDMIVSAGYNIGAPEVEAVLDRHPDVAECAVVGVPDADRGNVVHAAVVLRAGVDGSDEKVRELQDFVKSTAAPYKYPRSIVFVTELPRNPSGKLQRFKVREQWQAAR GT:EXON 1|1-536:0| BL:SWS:NREP 1 BL:SWS:REP 30->529|BCLA_THAAR|5e-60|31.2|500/527| PROS 194->205|PS00455|AMP_BINDING|PDOC00427| TM:NTM 2 TM:REGION 103->125| TM:REGION 238->260| SEG 110->121|avvkaggvvvtt| SEG 180->192|tftdvataaddvv| SEG 293->307|llkrddldglrtlrr| BL:PDB:NREP 1 BL:PDB:REP 204->530|2v7bA|2e-53|38.8|320/489| RP:PDB:NREP 1 RP:PDB:REP 38->534|3e7wA|7e-59|14.8|487/508| RP:PFM:NREP 1 RP:PFM:REP 67->459|PF00501|2e-40|37.4|390/405|AMP-binding| HM:PFM:NREP 1 HM:PFM:REP 67->460|PF00501|3.8e-85|35.5|391/418|AMP-binding| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 1 RP:SCP:REP 22->531|1md9A|1e-62|21.8|500/536|e.23.1.1| HM:SCP:REP 27->535|1pg4A_|3.2e-139|39.4|497/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 8739 OP:NHOMOORG 974 OP:PATTERN 55-2--AIJIKKIIHC1175642IC445326B3251--333317656954433----1---355---3 2696W553334B4BWwVKK-Jf66klKKKKKNlfmfg***4WDb4224266-A5B888--OII1SJfRJS9--------397G224213322-3--1--213112B1222--------------132335313343AAAEE222R8449487811111113112115G5K111111112111175688--2D9KEEEEEGDFCFEFFHD78CCCIEFFAJDBC45222222O3244444444444444422351-1-11-1---122211-11223111---1-----------------------------------1---11---31111211-1-D-33------7--81-51B84262--B31111---623JAAI1111186YRc747XOZRP45554454557-EDHEDLEEBIL-966B9A8C9EB9EJ897DDI7A88DCH22222222C2123C97----------111111111111111----3EHcG-6KJAGINOOOPIFGGCFEIPRRSSAOWDcYkna36IICBEDGDUBJLVO33D1132742222222445G9A4gLD6567596555-5954944465675XJ891211-12221-111-11-111222511481684756645666538855567475688--14853------96965447778799876-677777878878877677676865FD47566777777667667735455651-444444344343---4-1-31344257G47111111-111-111277877589BAC5HJIJKOIICHGIE9G8L42232423222337566667435545544443332222--2-112222--------1-------------------------------------251 1-119G5-951-66DILFFLGGFIHJNFECDCE9BDFJEKHIJDDEC7EGFIJLCBE9ADAC82232232332223333332222222-GK8LCAA434344CHIE14A6ICI685C8424576GB5B6L*D1DBH7657C759646532B5-K6B89LADM9UBKEJCTE9EKF1276g655B5JNKrGTQ54F9C9B ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 529 STR:RPRED 98.7 SQ:SECSTR #######GGHHHHHHcTTTccccccccccccccHHHHccHHHHHHHHHHHHcTTTcEEEEETTEEEEHHHHHHHHHHHHHHHTTTccccccccEEEEEcccHHHHHHHHHHHHHTccEEEEETTccHHHHHHHHHHHTccEEEEcccccTTcccccccEEEHHEHHHHEEHHHTcccccccGGGcccTTcEEEEEEEccTTcccEEEEEEHHHHHHHHHHHHHHHcTTTTTcEEEEcccTTcTHHHHHHHHHHHTTcEEEEccHHHcHHHHHHHHHHHcccEEEEcHHHHHHTcTTccTTTcTTccEEEEccccccHHHHHHHHHHcTTcEEEEccccGGGccccEEHHTTcccccccEEcTTcEEEEEcTTcccccTTccEEEEEEcTTcTcHHHHHHHEEEccccEEEEEEEEEEEETTEEEEEEEcccEEEETTEEEEHHHHHHHHHHcTTEEEEEEEEEcccccccEEEEEEEEcccccccHHHHHHHHHHHHHHccGGGcccEEEEcccccccTTccccHHHHHHHHHHHc DISOP:02AL 1-2, 534-536| PSIPRED ccccccccccccHHHcccccccHHHHHccccccccccccHHHHHHHHHHHHcccccEEEEEcccEEcHHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHcccEEEEEcHHHHHHHHcccccEEEcccccHHHHHHHHHcccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHHHHccEEEEcccccHHHHHHHHHHccccEEEccHHHHHHHHHccccccccccEEEEEccccccHHHHHHHHHHcccEEEEccccHHHHHHHccccccccccccccccccccEEEEEcccccccccccEEEEEEEccccccccccHHHHHHHccccEEEccEEEEccccEEEEEEcEEEEEEEccEEEcHHHHHHHHHHcccEEEEEEEcccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHccccccccEEEEEcccccccccHHHHHHHHHHHHccc //