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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56090.1
DDBJ      :             putative NADH-dependent flavin oxidoreductase
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  618/915 : Eukaryota  122/199 : Viruses  0/175   --->[See Alignment]
c.1.4c.3.1
:793 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->343 3c4aA PDBj 2e-33 32.6 %
:BLT:PDB   398->750 2h8zA PDBj 2e-58 39.7 %
:RPS:PDB   1->40 2cduB PDBj 1e-04 18.4 %
:RPS:PDB   26->331 3c96A PDBj 3e-20 20.1 %
:RPS:PDB   384->755 1bwkA PDBj 6e-52 17.9 %
:RPS:SCOP  1->13 1sezA1  c.3.1.2 * 1e-04 61.5 %
:RPS:SCOP  3->124 2gqfA1  c.3.1.8 * 2e-07 21.4 %
:RPS:SCOP  131->332 3c96A1  c.3.1.2 * 4e-15 16.7 %
:RPS:SCOP  396->753 1z41A1  c.1.4.1 * 1e-64 38.4 %
:HMM:SCOP  1->341 1k0iA1 c.3.1.2 * 2.5e-36 29.9 %
:HMM:SCOP  383->738 1oybA_ c.1.4.1 * 9.2e-108 44.9 %
:RPS:PFM   3->320 PF01494 * FAD_binding_3 3e-12 29.3 %
:RPS:PFM   397->727 PF00724 * Oxidored_FMN 2e-65 44.7 %
:HMM:PFM   398->733 PF00724 * Oxidored_FMN 1.3e-72 33.6 324/341  
:HMM:PFM   131->329 PF01494 * FAD_binding_3 1.5e-15 24.5 184/356  
:HMM:PFM   3->136 PF05834 * Lycopene_cycl 2.1e-06 23.6 123/374  
:BLT:SWISS 1->343 VIOD_CHRVO 3e-35 30.8 %
:BLT:SWISS 389->750 OYEC_SCHPO 2e-62 37.5 %
:PROS 183->193|PS00133|CARBOXYPEPT_ZN_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56090.1 GT:GENE BAD56090.1 GT:PRODUCT putative NADH-dependent flavin oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1384414..1386795 GB:FROM 1384414 GB:TO 1386795 GB:DIRECTION + GB:PRODUCT putative NADH-dependent flavin oxidoreductase GB:PROTEIN_ID BAD56090.1 LENGTH 793 SQ:AASEQ MRIAVIGGGPAGLYFSALMKQLDPSHEITIWERNAPDDTFGFGVVFSDETLGGIEHADEQIYRGMSEQFARWSDIDIHYRGQVRTSGGQGFAAMSRKELLRLLQRRCTDLGVTIHFRTPAPDVEDLAATHDLVLASDGINSAVRSTFADVFEPSLDPRRNKYMWLGTDLVFEAFEFFVKHTPHGIMQVHAYPFSAQQSTFIVEMHESVWREAGFAAFADREFAPGENDEQSIALIAELFAAELDGHRLQANNSRWISFTTVRNRTWRHGNIVLIGDAAHTAHFSIGSGTKLAMEDALALAACLHENDSVAAGLAAYETERKPVVESVQRAAQASLEWFESIAQYTDQHPDQFAFNLLTRSRRITYDNLRLRDDGFVEAIDGWYLSTQDAAAAAPRPPMFYPLRLKDVELPNRILVSPMDMYSAVDGVPTDFHLVHLGSKALGGAGLVMTEMVCVSPEGRITPGCAGLYTPEQERAWARVVDFVHGHTRAKIGVQLGHSGRKGATKVMWEGIDDPLESGGWETVGPSAIPYGPASRTPREITRAEMDRVTREFADAAAAAARAGFDLLELHCAHGYLLSAFLSPLANRRTDEFGGSLDNRLRFPLRVFDEIKQVWPADRPLSVRISATDWAEGGNTVDDAVEIARAFAAHGVDVLHVSSGQVVKHEKPAYGRSYQTPFADRIRQEVGVPHGVAVVAVGAISSHDDVNSVLLAGRADLVAIGRAHLWDPQWTLHAAVEQGYRGEAAEWPAPFRAGNRKPPTGRTDGPPPRLELIRATGTPAPRRRWTPARVTAAV GT:EXON 1|1-793:0| BL:SWS:NREP 2 BL:SWS:REP 1->343|VIOD_CHRVO|3e-35|30.8|331/373| BL:SWS:REP 389->750|OYEC_SCHPO|2e-62|37.5|355/395| PROS 183->193|PS00133|CARBOXYPEPT_ZN_2|PDOC00123| SEG 232->243|ialiaelfaael| SEG 553->562|adaaaaaara| SEG 685->698|vgvphgvavvavga| SEG 757->768|pptgrtdgpppr| SEG 773->792|ratgtpaprrrwtparvtaa| BL:PDB:NREP 2 BL:PDB:REP 2->343|3c4aA|2e-33|32.6|325/357| BL:PDB:REP 398->750|2h8zA|2e-58|39.7|345/359| RP:PDB:NREP 3 RP:PDB:REP 1->40|2cduB|1e-04|18.4|38/448| RP:PDB:REP 26->331|3c96A|3e-20|20.1|304/381| RP:PDB:REP 384->755|1bwkA|6e-52|17.9|368/399| RP:PFM:NREP 2 RP:PFM:REP 3->320|PF01494|3e-12|29.3|300/338|FAD_binding_3| RP:PFM:REP 397->727|PF00724|2e-65|44.7|318/340|Oxidored_FMN| HM:PFM:NREP 3 HM:PFM:REP 398->733|PF00724|1.3e-72|33.6|324/341|Oxidored_FMN| HM:PFM:REP 131->329|PF01494|1.5e-15|24.5|184/356|FAD_binding_3| HM:PFM:REP 3->136|PF05834|2.1e-06|23.6|123/374|Lycopene_cycl| GO:PFM:NREP 4 GO:PFM GO:0004497|"GO:monooxygenase activity"|PF01494|IPR002938| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01494|IPR002938| GO:PFM GO:0010181|"GO:FMN binding"|PF00724|IPR001155| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00724|IPR001155| RP:SCP:NREP 4 RP:SCP:REP 1->13|1sezA1|1e-04|61.5|13/353|c.3.1.2| RP:SCP:REP 3->124|2gqfA1|2e-07|21.4|117/253|c.3.1.8| RP:SCP:REP 131->332|3c96A1|4e-15|16.7|180/269|c.3.1.2| RP:SCP:REP 396->753|1z41A1|1e-64|38.4|333/337|c.1.4.1| HM:SCP:REP 1->341|1k0iA1|2.5e-36|29.9|224/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 383->738|1oybA_|9.2e-108|44.9|341/0|c.1.4.1|1/1|FMN-linked oxidoreductases| OP:NHOMO 2764 OP:NHOMOORG 768 OP:PATTERN ------1111111121----1--32111-121-----------11----1231--------111---- 211-21122221-271122-23--2722222154444AHG15133-212221223324--2-613-867631111111--412-1-1-1111-------1-2-2-91211---------------1--232----1111-----1-5122221--11------1--13231------------21211---21222222232122222211223222311112213333332321111111111111112221-13-11-----12--11---1321------------------------------------211---1112-1366222222322312BB1-1-3-1-11-1--444131-7-1334-1113129221-----526781-132222222222221-3-45544544344-8332223454454422112622224543333333334222412------------------------------26C1128524ABEBDE5666577A8777818H7A7787125571111153674232313435211-----11142219641-1-13---1-111142342111114-21121---------------------1143453-734513555537533333544365---1---------23462552333233322-322233223233322222356575332122222222221212241222222--322333322333---1-----122213443111215---------776683743351AA99797C6B8875A69---------13566333335452256343443331-----11441111--------1-1-------1--------1-1--------1-1-----211 ----763-841-1236A879877EGE92311111111222122333857EFMNL78432333637123-85862D2211259999915-5VBA5K64442323CJC-33C---------------------------------2---------------------------57---421-----279IB68721PJNM1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 756 STR:RPRED 95.3 SQ:SECSTR ccEEEEcccHHHHHHHHHHHHTTcccEEEEEEccccccccccEEEEcHTTcHHHHHHHcEEEcEEEEEcTTccEEcEEEEcGGGGTccccEEEEEHHHHHHHHHHHHHHHHcTTcEEEcETTccEEEEEEcEEEEcccTTcHHHHHHcTTccccEEEEEEEEEEEEEEcccTTccEEEEEEcTTccEEEEEEccHHHHTTTcEEEEEEEEEEEHHHHccccccccTTccccHHHHHHHHTTcccTTccHHHHHHEEEEEcccccccccTTEEEcTHHHHcccccTTcTHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcHHHHHHTHHHHHHTHHHHccHHHHHHHHHHHHHccccccccccHHccTTccccccTTcGGGccEEETTEEEcccEEccccccccccTcccTTTHHHHHHHHTccTTcEEEEEEEEccGGGcccTTccccccHHHHHHHHHHHHHHHHTTccEEEEEEEccGGGccHHHHHHTccEEEccccccccHHHHHHHHHTTccEEEccHHHHHHHHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHcTTTcccccTTcccHHHHHHHHHHHHHHHHHHHcTGGGEEEEEcTTccTTTccGGGHHHHHHHHHHHHHHTTccccEEEEcTTcccTTccTTccccccccTTHHHHHccccEEEEcccTTcHHHHHHHTTcTTEEEEccHHHHHcTTHHHHHHHHHTcccccccGGGTTccccTG##################################### DISOP:02AL 792-793| PSIPRED cEEEEEcccHHHHHHHHHHHHcccccEEEEEEccccccccccEEEEcHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccEEEEccccEEEEcHHHHHHHHHHHHHHcccEEEEccEEcccccccccccEEEEEccccHHHHHHHHHHcccccccccccEEEEEcccccccHHHHHccccccEEEEEEEEcccccEEEEEEcccccEEEEEccccccccccccccHHHHHHHHHHHHcccccccHHHccccHHHccccccccccccccEEEEcccHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHccccccccccccccccccEEEccEEEcccEEEccccccccccccccHHHHHHHHHHHccccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHccccEEEEEccccccccccccccccHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHcccccEEHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHcccccccccccccHHHccccc //