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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56093.1
DDBJ      :             putative oxygenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  44/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.3.1
:409 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   72->324 3c96A PDBj 4e-06 13.0 %
:HMM:SCOP  1->394 1k0iA1 c.3.1.2 * 1.5e-10 19.5 %
:HMM:PFM   4->39 PF03807 * F420_oxidored 5e-05 47.2 36/96  
:HMM:PFM   103->178 PF12017 * Transposase_37 0.00037 22.7 75/236  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56093.1 GT:GENE BAD56093.1 GT:PRODUCT putative oxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1389062..1390291 GB:FROM 1389062 GB:TO 1390291 GB:DIRECTION + GB:PRODUCT putative oxygenase GB:PROTEIN_ID BAD56093.1 LENGTH 409 SQ:AASEQ MPSITIVGAGQSGLQLGFGLLAAGYEVRMVSNRTPEQIHQGRVTSSQCMFGSSLARERVLGIDFWGSECPDVEGIGFTVPDGAGGRAISWDSRLDLPAQSVDQRVKMPRWMAEFTARGGVLDIHDATVDDLEDYASSSDLVLVAAGKGEIAKLFDRDAERSTFATPQRALALTYVRGMTPREPFSAVSFNMIPGIGEYFVFPALTTTGPCEIMVMEGVPGGPMDCFDGVTDPQQHLELALGVVRTYLPWEAERCRELELTDDLGVLAGRFPPTVRRPVGVLPSGATVLGMADVVVLNDPVTGQGSNNAAKCASSYLASILEHGDRPFDRAFMQDTFERYWDYARYVATWTNALLVPPPEHVLRLLGAAGANPRIARRFANGFDDPRDFFHWFMDPDSAKSYLDDLAVAA GT:EXON 1|1-409:0| SEG 8->24|gagqsglqlgfgllaag| RP:PDB:NREP 1 RP:PDB:REP 72->324|3c96A|4e-06|13.0|246/381| HM:PFM:NREP 2 HM:PFM:REP 4->39|PF03807|5e-05|47.2|36/96|F420_oxidored| HM:PFM:REP 103->178|PF12017|0.00037|22.7|75/236|Transposase_37| HM:SCP:REP 1->394|1k0iA1|1.5e-10|19.5|267/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 54 OP:NHOMOORG 44 OP:PATTERN -------------------------------------------------------------------- --------------1----------1----------6-3--1-1--------2-------1-----1111-------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11------1------------------------------------------------------------------------------------------------------------1111111--------------11-1111----1-----1-------------------------21----------------------------12--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-1---1----------------------------------------------------------------11------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 310 STR:RPRED 75.8 SQ:SECSTR #######################################################################EcEEEEEcTTccEEEEEEGGGTccccEEEEEHHHHHHHHHHHHHHHHcTTcEEEcEETTccEEEEEEcEEEEcccTcHHHHHHcTTccccEEEEEEHTccGGEEEEEEEEcccTTccEEEEEEcTTccEEEcHHHHTTTcEEEEEEEEEEHHHHccccccccTTccccHHHHHHHHTTcccTTccHHHHHHTccEEEEEEEEEcccccccccTTEEE#cTHHHHcccccTTcTHHHHHHHHHHHHHHHHHcccGGGGGGHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHTTcHHHHHHHHHHH########################### DISOP:02AL 409-410| PSIPRED ccEEEEEcccHHHHHHHHHHHHcccEEEEEEcccHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccEEEEEEccccccccEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHcccccEEEEcccccHHHHHccccccccccccccccEEEEEEEcccccccccccEEEEEcccccEEEEccccccccEEEEEEEcccccHHHHHcccccHHHHHHHHHHHHHHHcHHHHHHHHcccccccccEEcccccccccccccccccccEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHcccccccHHHHHcccHHHHHHHHHHHHccc //