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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56094.1
DDBJ      :             putative oxygenase
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  342/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
b.45.1c.3.1
:569 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   410->559 1rz0A PDBj 6e-21 44.4 %
:RPS:PDB   237->349 3cuqB PDBj 2e-07 10.4 %
:RPS:PDB   395->565 1ejeA PDBj 1e-38 17.8 %
:RPS:SCOP  410->560 1rz0A  b.45.1.2 * 3e-46 42.6 %
:HMM:SCOP  3->357 1k0iA1 c.3.1.2 * 1.3e-13 26.7 %
:HMM:SCOP  406->570 1uscA_ b.45.1.2 * 5.7e-55 43.6 %
:RPS:PFM   425->557 PF01613 * Flavin_Reduct 1e-19 42.9 %
:HMM:PFM   419->560 PF01613 * Flavin_Reduct 3.7e-40 35.9 142/155  
:HMM:PFM   7->46 PF02558 * ApbA 1.9e-06 40.0 40/151  
:BLT:SWISS 395->569 NTAB_CHEHE 1e-34 42.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56094.1 GT:GENE BAD56094.1 GT:PRODUCT putative oxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1390288..1391997 GB:FROM 1390288 GB:TO 1391997 GB:DIRECTION + GB:PRODUCT putative oxygenase GB:PROTEIN_ID BAD56094.1 LENGTH 569 SQ:AASEQ MSAQRRIAIVGAGQAGALVALGLRRHGCAVTLIGDRDPDQVRAGGVLSSQCLFGSAVRVLDRIVDGGLAAPPIDRLALTVDGVGTVVSGFDAPAQSIDQRVACAALIEDFVAAGGDFRVADIDPAGLDVLAGHHDLTIVATGTGDLGRMFVRDAVRSPYDRPQRALAVAYVHGLLPDETGAELTITVAPGVGELITLPALTTTGPCSILVFEGVPGGPMDRFEDVTGPEEHLRRCQKVLEEVFPAVAARARSVELTDEGAVLRGRLTPTVRKPVAYTASGHPVLGLADAVVLNDPVTAQGANNAVHAAGSYLDAVLHRGARPFDAEWMHETFESFWRSWGRWSVAWTNRVLAGLPAHVVDLVPVAAQEPAVAALFAAGFDDPSTLHDWWFDPGDAERMLAAVRAAERSVDPRALRNAFGQYATGVTVVTTRAPDGRKIGVTANSFTSVSLDPPLIAWCPAKKAPSLPDLIAASHFAVNVLAADQHELSRQFATPAPDKFADVAYRDGIAGVPLLERSIARFQCRTVQRVEAGDHIIFIGEVEHFDTSDGAPLVFHSGGYRIAADHPDFA GT:EXON 1|1-569:0| BL:SWS:NREP 1 BL:SWS:REP 395->569|NTAB_CHEHE|1e-34|42.0|174/322| SEG 5->25|rriaivgagqagalvalglrr| SEG 361->377|lvpvaaqepavaalfaa| BL:PDB:NREP 1 BL:PDB:REP 410->559|1rz0A|6e-21|44.4|142/147| RP:PDB:NREP 2 RP:PDB:REP 237->349|3cuqB|2e-07|10.4|106/204| RP:PDB:REP 395->565|1ejeA|1e-38|17.8|169/192| RP:PFM:NREP 1 RP:PFM:REP 425->557|PF01613|1e-19|42.9|133/150|Flavin_Reduct| HM:PFM:NREP 2 HM:PFM:REP 419->560|PF01613|3.7e-40|35.9|142/155|Flavin_Reduct| HM:PFM:REP 7->46|PF02558|1.9e-06|40.0|40/151|ApbA| RP:SCP:NREP 1 RP:SCP:REP 410->560|1rz0A|3e-46|42.6|148/153|b.45.1.2| HM:SCP:REP 3->357|1k0iA1|1.3e-13|26.7|225/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 406->570|1uscA_|5.7e-55|43.6|163/178|b.45.1.2|1/1|FMN-binding split barrel| OP:NHOMO 775 OP:NHOMOORG 364 OP:PATTERN ------1111111111-1-----------1-------------------------------------- --1-6--1--11--52233-33--443333335444F4MG-63812-1-22-6521-2--532-5135571-----------3------------------------11---------------------------33322---12-11-11---11121122-1-----1221-22221-1211112---3-----------------1--------11311--------------------------------------------------------------------------------------------------------------------------------1---------------------1--211------1144312-1--31--11-111112-22-22-2-511-7557322135433522112-312222221222222-11--111111111111---1111111111111-----1411-31111344645411114452221121836576311113211113121411111----------------64----------------------------13----------------------------------1---1--------1------1------------------1---1-1111111111-111111111111111111111111-------------------1--11111--1------------------------1---3111---1------1-55545161--3-11115333235331232------------------------11----------------11--11-------------------------------------1--11-111--- ------------111--------------------------------------------------------------------------------2-------111----2-----------------------------------------------1-----1---------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 435 STR:RPRED 76.4 SQ:SECSTR ########################################################################################TccccEEEEEHHHHHHHHHHHHHHHHcTTcEEEEETTEEEEEEETTccEEEEEEcEEEEcccTTcHHHHHHcEEEEEEEEEEEEEEcccTTccEEEEEEcTTccEEEEEEcHHHHTTTcEEEEEEEEEEHHHHccccccccTTccccHcccHHHHHHHHHHHHcHHHHHHHHHEEEHHHHGGGcccccHHHHHHHHHHTcccHHHHTTcccccHHHHHHHHHHHHHHHHHTTcEEEHHHHHHHHHHTcccccccHHHHHHH#############################################ccHHHHHHTTTcccccGGGGGGTcTTccEEcEEEEEEcTTccEEEEEEccEEEEETTTTEEEEEEcTTcHHHHHHHHHcEEEEEEccGGGHHHHHHTTccccHHHTccEEccccccccEETTccEEEEEEEEEEEEETTEEEEEEETTEEcHHHHccEEEEETTEEEEcccccc# DISOP:02AL 1-3, 392-414, 563-564, 567-569| PSIPRED ccccEEEEEEEccHHHHHHHHHHHHcccEEEEEEcccHHHHHcccccccHHHHHHHHHHHHHHHccccccccccEEEEEcccccccEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHcccEEEEEcccccHHHHccccHHcccccccHHcEEEEEEcccccccccccEEEEEEEccHHHHHHccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHcccccccccEEEccccccccccccccccccEEEEEccEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccHHHHHHHHcccccccHHHHHHccHHHHHHHHcccccccccccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEEEEEEEccccEEEEEEcccccHHHHHHHccEEEEEEccHHHHHHHHHHcccccccccccccccccccccEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEEcccccEEEEccEEEEcccccccc //