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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56096.1
DDBJ      :             putative regulator
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  63/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:289 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   30->93 1biaA PDBj 2e-04 24.6 %
:RPS:SCOP  42->94 2jn6A1  a.4.1.19 * 3e-04 15.1 %
:RPS:PFM   24->84 PF07848 * PaaX 1e-05 39.3 %
:RPS:PFM   108->275 PF08223 * PaaX_C 2e-27 40.5 %
:HMM:PFM   106->279 PF08223 * PaaX_C 1.9e-58 42.5 174/182  
:HMM:PFM   23->85 PF07848 * PaaX 4.8e-18 33.3 63/70  
:BLT:SWISS 58->273 PAAX_ECOLI 6e-13 22.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56096.1 GT:GENE BAD56096.1 GT:PRODUCT putative regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1392393..1393262) GB:FROM 1392393 GB:TO 1393262 GB:DIRECTION - GB:PRODUCT putative regulator GB:PROTEIN_ID BAD56096.1 LENGTH 289 SQ:AASEQ MTAELEPTGAGTAGGRDTRLAQFIITIFGLCARAEGNWLSVASVVALMADLGAEGQAVRSSISRLKRRGVLVSERHGGAAGYSLAPQTLEVIAEGDIRIFHRTRATEDDGWVVVVFSVPETEREKRHSLRTTLTRLGFGTAAPGVWVAPGNLVRETEQTLQRRGLSSYVDLFRGRHLGFGDPREKVTTWWDLDELTALYTEFLQQYRPVLYRVTSETVTAREAFQLYVPMLTQWRRLPYRDPGIPLSLLPPAWQGEAAGTLFDQLNEVLNPLAHKHALAVIHGKRPQVS GT:EXON 1|1-289:0| BL:SWS:NREP 1 BL:SWS:REP 58->273|PAAX_ECOLI|6e-13|22.4|214/100| SEG 8->15|tgagtagg| SEG 129->136|lrttltrl| RP:PDB:NREP 1 RP:PDB:REP 30->93|1biaA|2e-04|24.6|61/292| RP:PFM:NREP 2 RP:PFM:REP 24->84|PF07848|1e-05|39.3|61/70|PaaX| RP:PFM:REP 108->275|PF08223|2e-27|40.5|168/176|PaaX_C| HM:PFM:NREP 2 HM:PFM:REP 106->279|PF08223|1.9e-58|42.5|174/182|PaaX_C| HM:PFM:REP 23->85|PF07848|4.8e-18|33.3|63/70|PaaX| RP:SCP:NREP 1 RP:SCP:REP 42->94|2jn6A1|3e-04|15.1|53/89|a.4.1.19| OP:NHOMO 81 OP:NHOMOORG 71 OP:PATTERN -------12112222----------------------------------------------------- ----3-------------------------------1-11-1-1--------2-------111-111111--------------------------------------------------------------------------------------------------------------------11----------------------1--------22--1-------1-----------------------------------------------------------------------------------------------------------------------1---------------------1-------------111---------------------------------------------1--------------------------1-------------------------------------11111------------------------11-------------------------------------1------------------------------------------------------------------------------------------1--------------------1---1---11--111---1-1-----1--11--------------------------------------------------------------1---------------11111-----------11---1111----------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 62 STR:RPRED 21.5 SQ:SECSTR #############################HHHHTTcccccHH###HHHHHHTccHHHHHHHHHHHHHTTcccEEETTTEEEcccccccccHHHH################################################################################################################################################################################################### DISOP:02AL 1-3, 287-289| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHccccEEEHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEcccccHHHHHHHHHHHHHHcccccccccEEcccccHHHHHHHHHHccccccEEEEEccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc //