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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56097.1
DDBJ      :             putative acyl-CoA thioesterase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  313/915 : Eukaryota  113/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:300 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->298 1c8uA PDBj 2e-38 35.2 %
:RPS:PDB   13->298 3cjyA PDBj 4e-28 19.9 %
:RPS:SCOP  15->121 1c8uA1  d.38.1.3 * 9e-14 39.6 %
:RPS:SCOP  131->298 1c8uA2  d.38.1.3 * 7e-35 29.8 %
:HMM:SCOP  5->121 1c8uA1 d.38.1.3 * 1.8e-29 36.3 %
:HMM:SCOP  123->301 1c8uA2 d.38.1.3 * 1.8e-35 35.7 %
:RPS:PFM   216->295 PF02551 * Acyl_CoA_thio 3e-13 47.4 %
:HMM:PFM   68->108 PF02551 * Acyl_CoA_thio 1.1e-05 57.1 35/132  
:HMM:PFM   172->296 PF02551 * Acyl_CoA_thio 2.8e-23 33.3 117/132  
:BLT:SWISS 40->298 TESB_ECOLI 7e-38 35.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56097.1 GT:GENE BAD56097.1 GT:PRODUCT putative acyl-CoA thioesterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1393472..1394374 GB:FROM 1393472 GB:TO 1394374 GB:DIRECTION + GB:PRODUCT putative acyl-CoA thioesterase GB:PROTEIN_ID BAD56097.1 LENGTH 300 SQ:AASEQ MTDTMTTSGIFTAAITLTPAHPEHFDLAFTATTQPCPWPKAYGGDLVAQAAVAAMRSVTDAKTMHSMHSYFLRPADIGADVRYEVEILRDGRGYSTRQVRGYQNGKPIYVGLANFAAGEPGGSYAATLTETVPDPDSLPSSADYLRDRSGGSMTEESKAYWSAGRSFDMRHVPGPVYLEIDGERTPHQAVWVKPFDPLRPVDGLRADQRDLAALAYVCDYTILEPTLRVLGLPWADPALVTASLDHAMWFHRQGPVDDWLLYVQDAVAADHGRGLNAGRFFTRDGRHLATVLQEGMIRTR GT:EXON 1|1-300:0| BL:SWS:NREP 1 BL:SWS:REP 40->298|TESB_ECOLI|7e-38|35.2|250/286| SEG 204->215|lradqrdlaala| BL:PDB:NREP 1 BL:PDB:REP 40->298|1c8uA|2e-38|35.2|250/285| RP:PDB:NREP 1 RP:PDB:REP 13->298|3cjyA|4e-28|19.9|236/249| RP:PFM:NREP 1 RP:PFM:REP 216->295|PF02551|3e-13|47.4|78/119|Acyl_CoA_thio| HM:PFM:NREP 2 HM:PFM:REP 68->108|PF02551|1.1e-05|57.1|35/132|Acyl_CoA_thio| HM:PFM:REP 172->296|PF02551|2.8e-23|33.3|117/132|Acyl_CoA_thio| GO:PFM:NREP 2 GO:PFM GO:0006637|"GO:acyl-CoA metabolic process"|PF02551|IPR003703| GO:PFM GO:0016291|"GO:acyl-CoA thioesterase activity"|PF02551|IPR003703| RP:SCP:NREP 2 RP:SCP:REP 15->121|1c8uA1|9e-14|39.6|106/114|d.38.1.3| RP:SCP:REP 131->298|1c8uA2|7e-35|29.8|161/171|d.38.1.3| HM:SCP:REP 5->121|1c8uA1|1.8e-29|36.3|113/0|d.38.1.3|1/1|Thioesterase/thiol ester dehydrase-isomerase| HM:SCP:REP 123->301|1c8uA2|1.8e-35|35.7|171/0|d.38.1.3|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 532 OP:NHOMOORG 426 OP:PATTERN -------------------------------------------------------------------- ---111111111-124322-24112522222243333635-1-111111111211111--112111222211111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1112-----1111111111111111111111-1-11111111111-11111111111111-11---------1----------------------------------------------1131-----------------------------------------------11-11----------------------1----------------1--------1------------------------------11-111111111111111111111111111-------------11111111111111111-111111111111111111111111111111111111111111111111111--111111111111--------------1111---111-1111---111111111111-11111111111111111----------1111111111111111112111111111----------------------------------------------------------- ------------11--1--12111112-------1--1-1111-----11111---1-1111111----1---12--111-22113----211-112221-11323--4--12111-111111121121362-221-11111111-111-111111111---112------5714----------1131-23------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 299 STR:RPRED 99.7 SQ:SECSTR HHHHTTTcccHHEEEEccGGGEEccTEEEcGGEcGGTccEEcHHHHHHHHHHHHHHHTcTTccEEEEEEEEcccccTTcEEEEEEEEEEEccccEEEEEEEEETTEEEEEEEEEEccTTcccccccccccccccGGGcccHHHHHHHTccccccccccTTccTGGGEEEEEcccTTccTccccEETEEEEEEEETTccccccHHH#HHHHHHHHHHHHHHTTHHHHHHHHHTccccTTEEEEEcEEEEEEcccccccccEEEEEEEEEETTTEEEEEEEEEcTTccEEEEEEEEEEccEc DISOP:02AL 1-4, 119-130, 179-184| PSIPRED cccccccHHHHHHHEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEEEccccccccEEEEEEEEEcccEEEEEEEEEEEccEEEEEEEEEEEcccccHHccccccccccccHHccccHHHHHHHHcccccHHHHHHHcccccEEEEEcccccccccccccccEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEEcccccccEEEEEEEccEEcccEEEEEEEEEcccccEEEEEEEEEEEEcc //