Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56098.1
DDBJ : hypothetical protein
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 6/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
c.66.1
:182 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 71->147 1xxlA PDBj 3e-05 32.5 %
:RPS:PDB 71->143 3e05B PDBj 2e-07 13.7 %
:RPS:SCOP 72->138 1xxlA c.66.1.41 * 2e-10 31.3 %
:HMM:SCOP 22->143 1xxlA_ c.66.1.41 * 3e-16 36.7 %
:RPS:PFM 71->110 PF08241 * Methyltransf_11 3e-07 57.5 %
:RPS:PFM 87->129 PF08007 * Cupin_4 4e-04 40.0 %
:HMM:PFM 69->111 PF08241 * Methyltransf_11 2e-15 53.5 43/95
:BLT:SWISS 71->117 YT37_STRFR 4e-06 46.8 %
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56098.1
GT:GENE BAD56098.1
GT:PRODUCT hypothetical protein
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION complement(1394422..1394970)
GB:FROM 1394422
GB:TO 1394970
GB:DIRECTION -
GB:PRODUCT hypothetical protein
GB:PROTEIN_ID BAD56098.1
LENGTH 182
SQ:AASEQ MADAAELRTARGLIGGLAGVLAVWDRVRVAGREPRILDVGCGETKQYPGNVGVDVRPVPGVDVVADLRGGLPFDDASFDRVFAVHVLEHLADFLPLVDECRRVLRPGGILHVLSPWWRYVNAVADPTHLRLLDVQTFKGICARDPAWYPLHAGCDGASIFADLENRGSPVTPDPVHLARFFD
GT:EXON 1|1-182:0|
BL:SWS:NREP 1
BL:SWS:REP 71->117|YT37_STRFR|4e-06|46.8|47/345|
SEG 12->23|gligglagvlav|
SEG 48->66|pgnvgvdvrpvpgvdvvad|
BL:PDB:NREP 1
BL:PDB:REP 71->147|1xxlA|3e-05|32.5|77/231|
RP:PDB:NREP 1
RP:PDB:REP 71->143|3e05B|2e-07|13.7|73/192|
RP:PFM:NREP 2
RP:PFM:REP 71->110|PF08241|3e-07|57.5|40/96|Methyltransf_11|
RP:PFM:REP 87->129|PF08007|4e-04|40.0|40/185|Cupin_4|
HM:PFM:NREP 1
HM:PFM:REP 69->111|PF08241|2e-15|53.5|43/95|Methyltransf_11|
GO:PFM:NREP 2
GO:PFM GO:0008152|"GO:metabolic process"|PF08241|IPR013216|
GO:PFM GO:0008168|"GO:methyltransferase activity"|PF08241|IPR013216|
RP:SCP:NREP 1
RP:SCP:REP 72->138|1xxlA|2e-10|31.3|67/234|c.66.1.41|
HM:SCP:REP 22->143|1xxlA_|3e-16|36.7|120/0|c.66.1.41|1/1|S-adenosyl-L-methionine-dependent methyltransferases|
OP:NHOMO 6
OP:NHOMOORG 6
OP:PATTERN -------------------------------------------------------------------- --1---------------------------------1-----------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 112
STR:RPRED 61.5
SQ:SECSTR ######################################################################TTTTcTTcccccEEEEcccTTcHHHHHHHHHHHccTTcEEEEHHHHHHHHHHTTcEEEEEEEccEEcccccccTccccccHHHHcEEEEEccccccEEEccGGGcTTccHHH
DISOP:02AL 1-2|
PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHEEEEcccccccHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccEEEEEEccHHHHHHcccccEEEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccc
//
[GTOP]
