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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56100.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  209/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.218.1
:254 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   25->211 2be3A PDBj 2e-28 35.4 %
:RPS:PDB   25->211 2be3A PDBj 3e-43 36.5 %
:RPS:SCOP  25->217 2be3A1  d.218.1.8 * 8e-61 35.1 %
:HMM:SCOP  22->217 2be3A1 d.218.1.8 * 9.5e-59 38.1 %
:RPS:PFM   66->183 PF04607 * RelA_SpoT 6e-19 41.7 %
:HMM:PFM   65->185 PF04607 * RelA_SpoT 3.2e-38 41.4 111/112  
:BLT:SWISS 16->218 YWAC_BACSU 4e-56 48.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56100.1 GT:GENE BAD56100.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1398375..1399139) GB:FROM 1398375 GB:TO 1399139 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56100.1 LENGTH 254 SQ:AASEQ MTTHDGATVGPGPADLEDLRVLREQFVDFMLGYKFAIDEITTKINILREDFNSKHEYNPIEHVRSRLKSVESVLEKVQRKNYPMNLAAIRENVLDIAGVRVVCSFISDITTIRDMLVSQEDITLLEERDYITHRKPNGYQSLHLIVSIPVFRSDRTERMPVEIQIRTIAMDFWASLEHKIYYKYRGEVPPNLRSDLAQAAEVATQLDAKMEALHRQVDRSAPARSGPLDSLDLGMLYNSLAAENSAHRRTNHQG GT:EXON 1|1-254:0| BL:SWS:NREP 1 BL:SWS:REP 16->218|YWAC_BACSU|4e-56|48.3|203/210| BL:PDB:NREP 1 BL:PDB:REP 25->211|2be3A|2e-28|35.4|181/197| RP:PDB:NREP 1 RP:PDB:REP 25->211|2be3A|3e-43|36.5|181/197| RP:PFM:NREP 1 RP:PFM:REP 66->183|PF04607|6e-19|41.7|108/112|RelA_SpoT| HM:PFM:NREP 1 HM:PFM:REP 65->185|PF04607|3.2e-38|41.4|111/112|RelA_SpoT| GO:PFM:NREP 1 GO:PFM GO:0015969|"GO:guanosine tetraphosphate metabolic process"|PF04607|IPR007685| RP:SCP:NREP 1 RP:SCP:REP 25->217|2be3A1|8e-61|35.1|191/203|d.218.1.8| HM:SCP:REP 22->217|2be3A1|9.5e-59|38.1|194/0|d.218.1.8|1/1|Nucleotidyltransferase| OP:NHOMO 318 OP:NHOMOORG 209 OP:PATTERN -------------------------------------------------------------------- --------111-1--------1----------1---1111-----11111-1----1-----2-1------1111111--11-----------------------------------------------------------------------------------------------------111------12222222222222222222222222111211322222222222222222222222222221212112221222121111211-22222221112221111111111122222222222222111111111-222211121112121111133321---1321-21-----------------------------------------------------------1-------------------------------------------------------------11--1----------------------------------------------------1----11---------------------------------------------1-----------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------1-1---1--1----------------1-------1------------------------------11---------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 187 STR:RPRED 73.6 SQ:SECSTR ########################HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccEEEEEEEEccHHHHHHHHHHTccTTTTTTHHHHcTTcEEEEEEEccGGGHHHHHHHHHHTcccEEEEEEETTTTccTTccccEEEEEEEEEccTTccEEEEEEEEEEEHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHT########################################### DISOP:02AL 1-4, 216-225, 252-254| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHccccccHHHHHHHHHHHHHEEEEEccHHHHHHHHHHHHHHcccEEEccccccccccccccEEEEEEEEEcccccccccccEEEEEEEEHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHcccc //