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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56101.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  524/915 : Eukaryota  49/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:486 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  75->468 1pv6A  f.38.1.2 * 1e-08 17.2 %
:HMM:SCOP  14->476 1pw4A_ f.38.1.1 * 3.1e-63 29.9 %
:RPS:PFM   76->400 PF07690 * MFS_1 2e-10 33.6 %
:HMM:PFM   31->421 PF07690 * MFS_1 2e-46 28.5 337/353  
:BLT:SWISS 75->440 BMR3_BACSU 1e-23 29.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56101.1 GT:GENE BAD56101.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1399277..1400737 GB:FROM 1399277 GB:TO 1400737 GB:DIRECTION + GB:PRODUCT putative transporter GB:PROTEIN_ID BAD56101.1 LENGTH 486 SQ:AASEQ MSLIADRPAGSPAESRRIPRPAVLVAALGTVGIVVSLMQTLVIPIVPLLPGLLGTDATNASWVVTATLLAGAVAMPISGRLGDMFGKRRMVLVSLLMLVTGSLVCALASSLAPVIVGRVLQGFATGAIALGISIMRDELPPERVGSAIASMSATFGVGSAVGLPLAAVIAQHAHWHVLFWTSAGLGAVCAVLVFTLVPESPVRTPARFDYLGAVGLSVTLVALLVVITKGTAWGWSSRRVLGLSALAAVAALLWGWYELRRTAPLVDLRVSARPRVLLTNLASIAVGFALYGMSLTFPQLLLAPTATGHGFGLSMIEAGLALAPTGLLMMLLSPVSARVTAARGPKLTLALGAMVLGLGYLSATLWTGAVWQIVLAACTVAAGVGLAYSAMPALIMGAVPVTETAAANGLNALMRAIGTSTSAAVMSAVLANLTVELAGDRLPSREGFVAAFLISGAAAVLAVVITVFIPAKRTADAAATLGAESG GT:EXON 1|1-486:0| BL:SWS:NREP 1 BL:SWS:REP 75->440|BMR3_BACSU|1e-23|29.2|359/512| TM:NTM 13 TM:REGION 26->48| TM:REGION 57->79| TM:REGION 90->112| TM:REGION 146->168| TM:REGION 179->201| TM:REGION 209->231| TM:REGION 240->259| TM:REGION 277->299| TM:REGION 315->337| TM:REGION 345->367| TM:REGION 376->398| TM:REGION 415->437| TM:REGION 450->471| SEG 41->54|lvipivpllpgllg| SEG 63->74|vvtatllagava| SEG 90->104|mvlvsllmlvtgslv| SEG 237->256|srrvlglsalaavaallwgw| RP:PFM:NREP 1 RP:PFM:REP 76->400|PF07690|2e-10|33.6|274/347|MFS_1| HM:PFM:NREP 1 HM:PFM:REP 31->421|PF07690|2e-46|28.5|337/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 75->468|1pv6A|1e-08|17.2|331/417|f.38.1.2| HM:SCP:REP 14->476|1pw4A_|3.1e-63|29.9|394/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 1821 OP:NHOMOORG 604 OP:PATTERN ------6533333353-2111--1--------1--------1-543121-111----12--211---- 3231M21544723132333-35--784444417A9B8HMH2C2G321223314353-4--36326-2BCB3--------1--11-1112211-2-----------2-1-2---------------1-111-111--3331211141--1-----------------1--3--------------111---261666666686477665631543366822324525455546C11122222221112223312136-77-3212752244415312231----1---11---------------------------------1---5711121211112233-221-----2--2-333321--23211-----1-4112-1111-27552-13211111231333224---3--526-6--6441781877--22------1111---3333333321111113-------------111--11-1--1------133133123BAABAB87678AADB99896CF9D5768--333-1333221232-------2211----1-----2-11-2-1--11--211-11113-122-11--2----------------------11-33--3-11--1---1111-11222-11-1-111------------23622422223222222-22222232222222222215864522222-211211121212272212221--333333333333----14122------213-------1-------22222-1-----33434443-4442-321----------11221111111-1121-----------------------------------------------------------1---------1- ----11-------1-11413-21-512221--25422------21251-21-4122131---1---------2-1--------------33-1-11-1-22--221--------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-20, 471-486| PSIPRED cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccc //