Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56101.1
DDBJ : putative transporter
Swiss-Prot:
Homologs Archaea 31/68 : Bacteria 524/915 : Eukaryota 49/199 : Viruses 0/175 --->[See Alignment]
f.38.1
:486 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP 75->468 1pv6A f.38.1.2 * 1e-08 17.2 %
:HMM:SCOP 14->476 1pw4A_ f.38.1.1 * 3.1e-63 29.9 %
:RPS:PFM 76->400 PF07690 * MFS_1 2e-10 33.6 %
:HMM:PFM 31->421 PF07690 * MFS_1 2e-46 28.5 337/353
:BLT:SWISS 75->440 BMR3_BACSU 1e-23 29.2 %
:TM
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56101.1
GT:GENE BAD56101.1
GT:PRODUCT putative transporter
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION 1399277..1400737
GB:FROM 1399277
GB:TO 1400737
GB:DIRECTION +
GB:PRODUCT putative transporter
GB:PROTEIN_ID BAD56101.1
LENGTH 486
SQ:AASEQ MSLIADRPAGSPAESRRIPRPAVLVAALGTVGIVVSLMQTLVIPIVPLLPGLLGTDATNASWVVTATLLAGAVAMPISGRLGDMFGKRRMVLVSLLMLVTGSLVCALASSLAPVIVGRVLQGFATGAIALGISIMRDELPPERVGSAIASMSATFGVGSAVGLPLAAVIAQHAHWHVLFWTSAGLGAVCAVLVFTLVPESPVRTPARFDYLGAVGLSVTLVALLVVITKGTAWGWSSRRVLGLSALAAVAALLWGWYELRRTAPLVDLRVSARPRVLLTNLASIAVGFALYGMSLTFPQLLLAPTATGHGFGLSMIEAGLALAPTGLLMMLLSPVSARVTAARGPKLTLALGAMVLGLGYLSATLWTGAVWQIVLAACTVAAGVGLAYSAMPALIMGAVPVTETAAANGLNALMRAIGTSTSAAVMSAVLANLTVELAGDRLPSREGFVAAFLISGAAAVLAVVITVFIPAKRTADAAATLGAESG
GT:EXON 1|1-486:0|
BL:SWS:NREP 1
BL:SWS:REP 75->440|BMR3_BACSU|1e-23|29.2|359/512|
TM:NTM 13
TM:REGION 26->48|
TM:REGION 57->79|
TM:REGION 90->112|
TM:REGION 146->168|
TM:REGION 179->201|
TM:REGION 209->231|
TM:REGION 240->259|
TM:REGION 277->299|
TM:REGION 315->337|
TM:REGION 345->367|
TM:REGION 376->398|
TM:REGION 415->437|
TM:REGION 450->471|
SEG 41->54|lvipivpllpgllg|
SEG 63->74|vvtatllagava|
SEG 90->104|mvlvsllmlvtgslv|
SEG 237->256|srrvlglsalaavaallwgw|
RP:PFM:NREP 1
RP:PFM:REP 76->400|PF07690|2e-10|33.6|274/347|MFS_1|
HM:PFM:NREP 1
HM:PFM:REP 31->421|PF07690|2e-46|28.5|337/353|MFS_1|
GO:PFM:NREP 1
GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701|
RP:SCP:NREP 1
RP:SCP:REP 75->468|1pv6A|1e-08|17.2|331/417|f.38.1.2|
HM:SCP:REP 14->476|1pw4A_|3.1e-63|29.9|394/447|f.38.1.1|1/1|MFS general substrate transporter|
OP:NHOMO 1821
OP:NHOMOORG 604
OP:PATTERN ------6533333353-2111--1--------1--------1-543121-111----12--211---- 3231M21544723132333-35--784444417A9B8HMH2C2G321223314353-4--36326-2BCB3--------1--11-1112211-2-----------2-1-2---------------1-111-111--3331211141--1-----------------1--3--------------111---261666666686477665631543366822324525455546C11122222221112223312136-77-3212752244415312231----1---11---------------------------------1---5711121211112233-221-----2--2-333321--23211-----1-4112-1111-27552-13211111231333224---3--526-6--6441781877--22------1111---3333333321111113-------------111--11-1--1------133133123BAABAB87678AADB99896CF9D5768--333-1333221232-------2211----1-----2-11-2-1--11--211-11113-122-11--2----------------------11-33--3-11--1---1111-11222-11-1-111------------23622422223222222-22222232222222222215864522222-211211121212272212221--333333333333----14122------213-------1-------22222-1-----33434443-4442-321----------11221111111-1121-----------------------------------------------------------1---------1- ----11-------1-11413-21-512221--25422------21251-21-4122131---1---------2-1--------------33-1-11-1-22--221--------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
DISOP:02AL 1-20, 471-486|
PSIPRED cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccc
//
[GTOP]
