[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56107.1
DDBJ      :             putative ABC transporter ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:320 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   8->229 1vplA PDBj 3e-34 36.0 %
:RPS:PDB   7->229 3dmdC PDBj 5e-43 10.1 %
:RPS:SCOP  9->229 1b0uA  c.37.1.12 * 3e-46 30.8 %
:HMM:SCOP  11->221 1ii8.1 c.37.1.12 * 1.7e-63 42.6 %
:RPS:PFM   48->168 PF00005 * ABC_tran 4e-09 33.6 %
:HMM:PFM   48->168 PF00005 * ABC_tran 1.9e-19 32.7 113/118  
:HMM:PFM   31->56 PF02367 * UPF0079 4.4e-05 53.8 26/123  
:BLT:SWISS 8->313 DRRA_STRPE 4e-71 47.5 %
:PROS 140->154|PS00211|ABC_TRANSPORTER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56107.1 GT:GENE BAD56107.1 GT:PRODUCT putative ABC transporter ATP-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1414586..1415548) GB:FROM 1414586 GB:TO 1415548 GB:DIRECTION - GB:PRODUCT putative ABC transporter ATP-binding protein GB:PROTEIN_ID BAD56107.1 LENGTH 320 SQ:AASEQ MTIPRLPALAVRDLHKSYGDHQVLTGIHLDVPAGTIFSLLGPNGAGKTTLVRILATLARPDAGEVRVFGHDLLREADTVRGLIGVTGQFAAVDTVLTGTENLRLTGRLLHLPAAEARRRGDDLLERFDLVDAAGKPAGSYSGGMRRRLDLAMSLMGRPRLVYLDEPTTGLDPRSRRDLWSVIRELAAEGTTILLTTQYLEEADQLADRIAVLDGGTIVAEGTPDELKQRVPGGHLRLRFADAATLTAAARALGDPAAAQPDPEQLALRIASDGSAGEIKAVLDRLAEHGVTIEQLAVHTPDLDDVFFALTGHPTQVETAA GT:EXON 1|1-320:0| BL:SWS:NREP 1 BL:SWS:REP 8->313|DRRA_STRPE|4e-71|47.5|303/330| PROS 140->154|PS00211|ABC_TRANSPORTER_1|PDOC00185| SEG 235->258|lrlrfadaatltaaaralgdpaaa| BL:PDB:NREP 1 BL:PDB:REP 8->229|1vplA|3e-34|36.0|222/238| RP:PDB:NREP 1 RP:PDB:REP 7->229|3dmdC|5e-43|10.1|207/318| RP:PFM:NREP 1 RP:PFM:REP 48->168|PF00005|4e-09|33.6|119/123|ABC_tran| HM:PFM:NREP 2 HM:PFM:REP 48->168|PF00005|1.9e-19|32.7|113/118|ABC_tran| HM:PFM:REP 31->56|PF02367|4.4e-05|53.8|26/123|UPF0079| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 9->229|1b0uA|3e-46|30.8|221/258|c.37.1.12| HM:SCP:REP 11->221|1ii8.1|1.7e-63|42.6|209/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 48971 OP:NHOMOORG 1171 OP:PATTERN TUHBQPHJPQPLQLTMpIPSPRRbyQUgmagUHACBE7IGIFCYZPbkNQ*zg9MbOWWPNIIDX186 Vc*P*gignnraeWbUXPO-OoBBd*PPPPPSzvux****a*e*y**rvojT***SZmEF***k******mbbaa*fbWQ*gqB6A68UTPP4OHLG--FHSIKOgMZWR667777689ABBBBISPIRaMKVQXQtzz**MLL*dsepxeekdeSUQIKKPLjgbk***ZEQGKFDEQCLEElahWTgaAahy************************fsw**huvwxstv**ZdeefedcddeeddcXcXaYsYXa**aQTTVyxSS**dWSVjffehnmpsoktxvuopmoknksmpmbaaaababdbaaawmmcbcompkk*u*********g*hl***Zgjd*mhkj*koSK**mkadieTdeUkjMTYdLhaVVNGLIIPfa***aUv****************-rx*ok*t***SA**************JNN**********SRSSSSSS*fjPVng*66655444333378675888785595454KEHFFF************************u********CQ**y*o*qu******brhPVIQlZIJIIJIIRPSfupd**TeY*qWprigsJgcdUUajWbiifiz*Z*GIHREIHHJFC697877777DNBFGQPoktO*XWJSGrPTVVVMTcVSTUTVbYWYa5-DQXRR11-111****U*wu***v*y*su-yttu*v*uyxz*zrrtsrq*****ikZjhfiijjjkighkgig*nkinonqR5************23GFEGDEFNNPPUL*o*YZZWVWGMOLJSMQbMORQOJRHNUud********v****n***DCEBDCDDCKaliwlmmmmv*txvUTTQRRQORPHGFG66QRSSKKNO7A987787*DNB798B-8AB5F96HGG7CF887666VklRPexekbDhQ 1133dbJ-VJ8GPYPLHGBHSXSZQbTJJACABLKLBGFDDFGDBBIFKPQSaULNOFEEFED8B6851A76C8A69-889A79BH46-HFBHBCI899996ENLG6WrdfSbUfWWLGEBHMIlkDqF**g4fOiHIHBWGIYSDIDGFTFE*GVOMtGa*HmLeGzXb*WdUDISLD*BD9OQ*jm*I*yIH****j ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 311-320| PSIPRED cccccccEEEEEEEEEEEccEEEEEcccEEEEccEEEEEEccccccHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccHHHHcccHHHcccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHcEEEEEEccEEEEEccHHHHHHHHcccEEEEEEcccccHHHHHHHcccccEEEEccccEEEEEEEcccHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHcccccccccc //