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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56120.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  32/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:345 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   1->138 1dapA PDBj 5e-05 17.9 %
:RPS:SCOP  5->127 1ebfA1  c.2.1.3 * 2e-04 15.3 %
:HMM:SCOP  2->98 1xcbA2 c.2.1.12 * 3.6e-10 29.7 %
:HMM:PFM   5->74 PF01113 * DapB_N 2.3e-08 34.3 70/124  
:BLT:SWISS 188->301 SYI_HAES2 6e-04 32.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56120.1 GT:GENE BAD56120.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1426922..1427959) GB:FROM 1426922 GB:TO 1427959 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56120.1 LENGTH 345 SQ:AASEQ MTHTIVVVGLGTTGLAMAESLLRRTDVRIVGAADRDPAVVGADLGTLAGLGASGVTVIGEPSQLPGADLAIVATTSDLNLVVDTLVPLLERSYNVMSICEELSYPWSSHPDIARRLDETAKANGVTVVGTGANPGVLMDTLPLLLTTLTQRVERIVIRRRTNMSRYGAILSKFGLGLTPALFDGARARGAVVGHYGFEQAISALAAGLGWSLDAIVVDRVSPAIISETVRTGDHVVIEPGEIAAVTHAARGTLGGRTVIDLEIMFGFFDGSDPVRAGDDYRIEGSDQLIELSSPVGFESFVSTIAAAANVATAVVDAPPGLLCTGDLPVARIASKGTHLAEAESL GT:EXON 1|1-345:0| BL:SWS:NREP 1 BL:SWS:REP 188->301|SYI_HAES2|6e-04|32.5|114/100| SEG 38->55|avvgadlgtlaglgasgv| SEG 140->149|tlplllttlt| SEG 305->317|aaaanvatavvda| RP:PDB:NREP 1 RP:PDB:REP 1->138|1dapA|5e-05|17.9|123/320| HM:PFM:NREP 1 HM:PFM:REP 5->74|PF01113|2.3e-08|34.3|70/124|DapB_N| RP:SCP:NREP 1 RP:SCP:REP 5->127|1ebfA1|2e-04|15.3|118/168|c.2.1.3| HM:SCP:REP 2->98|1xcbA2|3.6e-10|29.7|91/0|c.2.1.12|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 37 OP:NHOMOORG 36 OP:PATTERN ----11-----------1-----1-------------------------------------------- -------------------------2----------1--1-----------------------1--------111---------------------------------1------------------------------11----1---------------------------------------------------------------1----------------------------------------------------------------------------11-------------------------1----------11-------------1----------------------11--111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------11-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 135 STR:RPRED 39.1 SQ:SECSTR ccEEEEEEcccHHHHHHHHHHTTcccEEEEEEEEccc#THHHHHHHcccccccEEEGGGGGGGTTTccEEEEcccTTGHTHHHHHHHHHTTTcEEEcccc##EccGGGHHHHHHHHHHHHHHHcEEEEccccTTcHHH############################################################################################################################################################################################################### DISOP:02AL 340-345| PSIPRED ccEEEEEEEccHHHHHHHHHHHHccccEEEEEEEccccccccccEEEEccccccEEEEEcHHHHHHccccEEEEccccHHHHHHHHHHHHcccEEEcccccEEccccccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHcccEEEEEEEEEEEEEcccccHHHHHHcccccccccccHHHHHccccEEEcHHHHHHHHHHcccEEccEEEEEEEccccccEEEccccEEEcccEEEEEEEEEEEEEccEEEEEEEEEEEEcccccccccccEEEEEEcccEEEEEccccccccHHHHHHHHHHHHHHHHcccccEEHHHccccccccccccccccccc //