[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56121.1
DDBJ      :             putative permease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  57/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:474 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   28->433 PF00324 * AA_permease 1.3e-29 20.9 392/479  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56121.1 GT:GENE BAD56121.1 GT:PRODUCT putative permease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1428005..1429429) GB:FROM 1428005 GB:TO 1429429 GB:DIRECTION - GB:PRODUCT putative permease GB:PROTEIN_ID BAD56121.1 LENGTH 474 SQ:AASEQ MTTRTHSSAVSERPARLHGKLGVVAISLMIIAGAAPLCVVGGPMALGLALGNGAGLPTAYLATLAVLLLFVIGFTTMTPFVRSAGAFYSYVHAGLGRMAGIGTGYLAMLSYTCIYIGLYVLLGIGTDAMVTAYGGPSIPWWVWAAAGLAIIAFLGHRNVEVSGKVLGVLLVAEVGLVVVLNAAILLRGGGPEGLSDGVVSLSDTFSGAPGVALIFAVLSFIGIEAAAVFRDEAKDPVRTVRRATVVSVTVVGLFYAVSSWAVISGIGDGQVVAAATADPEGLLSSVALQYLGRVGADLIVPLFVTSTFAAALTWHNILSRYTLSLSSRDLLPRRLAAVHPEHNSPHRGSLAVTAAVVVVVALAVAIGLDPMGQLYTWTSGLGSVGYVILLVLTCSAVLAFFRRESHDTPVFRALVAPVLGLGGLLVILAAMLLNLDLLAGAQQSVSVAIIVALLGSLALGPVVGRLRPTAGTQE GT:EXON 1|1-474:0| TM:NTM 12 TM:REGION 25->47| TM:REGION 56->78| TM:REGION 106->128| TM:REGION 139->161| TM:REGION 167->189| TM:REGION 209->231| TM:REGION 248->270| TM:REGION 302->324| TM:REGION 350->372| TM:REGION 380->401| TM:REGION 413->435| TM:REGION 444->465| SEG 41->69|ggpmalglalgngaglptaylatlavlll| SEG 144->155|aaaglaiiaflg| SEG 165->180|vlgvllvaevglvvvl| SEG 237->251|vrtvrratvvsvtvv| SEG 323->335|lslssrdllprrl| SEG 350->365|lavtaavvvvvalava| SEG 413->441|alvapvlglggllvilaamllnldllaga| HM:PFM:NREP 1 HM:PFM:REP 28->433|PF00324|1.3e-29|20.9|392/479|AA_permease| OP:NHOMO 90 OP:NHOMOORG 58 OP:PATTERN -------------------------------------------------------------------- -----1----1---2------1---7------31112-561---1-1-----7321----11----1311------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111-11-----------1--1-----11-1-----------------------------------------------------------------1--------11---2------11------11--------------------1------------------------------------------------------------------------------------------------------------------------------1---1-------------------------------1-11---------------------------------------------------------1-----------------------------------2--1------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-21, 469-474| PSIPRED ccccccccccccccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccc //