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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56122.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  681/915 : Eukaryota  187/199 : Viruses  1/175   --->[See Alignment]
b.35.1c.2.1
:365 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->363 1hdyA PDBj 3e-49 31.9 %
:RPS:PDB   1->356 1axeA PDBj 2e-55 29.3 %
:RPS:SCOP  1->209 1kolA1  b.35.1.2 * 9e-32 19.6 %
:RPS:SCOP  183->329 1bxzA2  c.2.1.1 * 1e-13 27.6 %
:HMM:SCOP  1->191 1dehA1 b.35.1.2 * 7.7e-68 45.8 %
:HMM:SCOP  157->330 1m6hA2 c.2.1.1 * 3.6e-46 40.5 %
:HMM:SCOP  318->365 1e3iA1 b.35.1.2 * 1.4e-07 50.0 %
:RPS:PFM   27->103 PF08240 * ADH_N 3e-17 51.9 %
:RPS:PFM   195->267 PF00107 * ADH_zinc_N 2e-08 45.8 %
:HMM:PFM   26->153 PF08240 * ADH_N 7.3e-32 46.6 103/109  
:HMM:PFM   195->316 PF00107 * ADH_zinc_N 1.9e-27 41.0 117/130  
:BLT:SWISS 2->363 ADH1_ALLMI 2e-49 32.2 %
:PROS 58->72|PS00059|ADH_ZINC
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56122.1 GT:GENE BAD56122.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1429467..1430564) GB:FROM 1429467 GB:TO 1430564 GB:DIRECTION - GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD56122.1 LENGTH 365 SQ:AASEQ MRAALFTDENTSVEITDIDLAAPLRNEVRVRIAAAGVCHSELHLVRGEWPVPAPLVPGHEGSGVITEVGPDVTHLAVGDHVVLSWNPYCGECRECLAGRETRCHQVATVINTTGSLLDGTSRLSRGGQRVNHYLGVSSWAEEVVVPATGAIKVRDDAPLESIALVGCAAATGVGAVVNTAQVKAGSTVAVIGCGGVGLNIVQGARLQGAERIVAVDLSPERAALAKTFGATDAIGLDGADAVEALRDLMPDGVDFAFDAIGHVTTTEAAIRALALGGAAVVVGLPAAGATASFEPLALAEMDARILGSNYGSIRPQFDIPKLVDLYMTGELLLDELITARRPLDEAAQALSDLASGAQLRQLLIP GT:EXON 1|1-365:0| BL:SWS:NREP 1 BL:SWS:REP 2->363|ADH1_ALLMI|2e-49|32.2|360/374| PROS 58->72|PS00059|ADH_ZINC|PDOC00058| TM:NTM 2 TM:REGION 157->179| TM:REGION 268->290| SEG 165->182|vgcaaatgvgavvntaqv| SEG 268->291|aairalalggaavvvglpaagata| BL:PDB:NREP 1 BL:PDB:REP 2->363|1hdyA|3e-49|31.9|360/374| RP:PDB:NREP 1 RP:PDB:REP 1->356|1axeA|2e-55|29.3|355/374| RP:PFM:NREP 2 RP:PFM:REP 27->103|PF08240|3e-17|51.9|77/108|ADH_N| RP:PFM:REP 195->267|PF00107|2e-08|45.8|72/128|ADH_zinc_N| HM:PFM:NREP 2 HM:PFM:REP 26->153|PF08240|7.3e-32|46.6|103/109|ADH_N| HM:PFM:REP 195->316|PF00107|1.9e-27|41.0|117/130|ADH_zinc_N| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08240|IPR013154| GO:PFM GO:0008270|"GO:zinc ion binding"|PF00107|IPR013149| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00107|IPR013149| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00107|IPR013149| RP:SCP:NREP 2 RP:SCP:REP 1->209|1kolA1|9e-32|19.6|194/201|b.35.1.2| RP:SCP:REP 183->329|1bxzA2|1e-13|27.6|145/174|c.2.1.1| HM:SCP:REP 1->191|1dehA1|7.7e-68|45.8|190/0|b.35.1.2|1/1|GroES-like| HM:SCP:REP 157->330|1m6hA2|3.6e-46|40.5|173/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 318->365|1e3iA1|1.4e-07|50.0|48/227|b.35.1.2|2/2|GroES-like| OP:NHOMO 4401 OP:NHOMOORG 913 OP:PATTERN 112-2-23888978841332231-81113362----------------1-221---111112111-34 4491932644711269866-6E22CS666669EEHFCGNM1846D46512-2DAD62311229393IFCB51----1-----911111--1--1-----1-3-2-51232--------------------------14421---384237332--11---12-121456811-----------3231142-729333333442344223965554222431262233333234133333333433334123331-4--3-5---3355211123353222111222211111112112122221222222222211221111211-14221222221164--1-----2--1-1----111121-11113--26145445-----656AC5147545633433443336-74337547364-CFE8FDCDDBBG462527376467434444444443764--23------------------------------2853212224BBBABCBA8A9BBCCBBBB3989A4976--33C21364522255423-11221112222231532131----1---1----4341-1-2-32945822-----111111-1-1----------3322134442B523322323342323332222---32--------58351456557677767-575566665657666566699857342758567877875755663433325--322222222222---3111114333212B82222-2--111----33435151217186884856668653555211212111-2333111-12322245756553434222---3111111--------1--------2---1-------2------1----111-1241 ----934-21--134FHKHGGNHMKLI9945555668866656856CACGAISKCF9A856752633342243534736533234473-AGBH7B4D8A3838768-461H5747845225483784I2Hi9-B7G844442263334-227384A27D2441473-134867123522G11234BGUcGKM43FDB93 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 365 STR:RPRED 100.0 SQ:SECSTR EEEEEcccTTcccEEEEEEEccccTTEEEEEEEEEEccHHHHHHHHTccccccccccccEEEEEEEEEcTTcccccTTcEEEEcccccccccTTTTcccccccTTcccccccccccTTccccEEETTEEEcccTTTcccccEEEEEGGGEEEEcTTccHHHHGGGGTHHHHHHHHHHTTccccTTcEEEEEcccHHHHHHHHHHHHTTccEEEEEcccGGGHHHHHHHTccEEEcGGGccccHHHHHHTTccccEEEEccccHHHHHHHHHTccTTTcEEEEcccccTTccccccTHHHHTTcEEEEccGGGccHHHHHHHHHHHHHTTccccGGGEEEEEEGGGHHHHHHHHHHTcccEEEEET PSIPRED cEEEEEEcccccEEEEEEEcccccccEEEEEEEEEEEcccEEEEEEccccccccccccccccEEEEEEcccccccccccEEEEcccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccEEEEEEcHHHEEEccccccHHHHHcccccHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHcccEEEEcccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHHccccEEEEEcccccccEEEccHHHHEEccEEEEEEEEcccccHHHHHHHHHHHHccccccHHEEEEEEEHHHHHHHHHHHHcccEEEEEEcc //