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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56135.1
DDBJ      :             putative 2,4-dienoyl-CoA reductase
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  642/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
c.1.4c.3.1c.4.1
:676 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->676 1ps9A PDBj 0.0 52.0 %
:RPS:PDB   2->676 1djqA PDBj 4e-59 20.7 %
:RPS:SCOP  5->342 1z41A1  c.1.4.1 * 4e-66 28.6 %
:RPS:SCOP  333->487 1ps9A3  c.4.1.1 * 9e-25 47.7 %
:RPS:SCOP  471->632 1ps9A2  c.3.1.1 * 1e-47 38.4 %
:HMM:SCOP  4->362 1vjiA_ c.1.4.1 * 2e-108 43.4 %
:HMM:SCOP  333->529 1ps9A3 c.4.1.1 * 9.8e-46 41.1 %
:HMM:SCOP  463->655 1djnA2 c.3.1.1 * 7.8e-25 34.4 %
:RPS:PFM   7->329 PF00724 * Oxidored_FMN 2e-59 45.1 %
:RPS:PFM   398->451 PF00070 * Pyr_redox 2e-04 48.8 %
:RPS:PFM   461->484 PF07992 * Pyr_redox_2 3e-04 66.7 %
:HMM:PFM   7->332 PF00724 * Oxidored_FMN 1.8e-84 38.1 323/341  
:HMM:PFM   378->519 PF07992 * Pyr_redox_2 7e-20 36.0 139/202  
:BLT:SWISS 3->676 FADH_ECOLI 0.0 52.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56135.1 GT:GENE BAD56135.1 GT:PRODUCT putative 2,4-dienoyl-CoA reductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1443427..1445457) GB:FROM 1443427 GB:TO 1445457 GB:DIRECTION - GB:PRODUCT putative 2,4-dienoyl-CoA reductase GB:PROTEIN_ID BAD56135.1 LENGTH 676 SQ:AASEQ MSSYPHLFEPLDLGFTTLRNRVVMGSMHTGLEDRAWDIDKLAAYFAERARGGVGLIITGGYAPNRTGWLLPFGAKLTTTTEAYRHRTVTRAVHAHGAKIALQILHAGRYSYLPGSVSASSIKAPINPFRPRKLSARGIEQTIRDYVRCAELARLAGYDGCEIMGGEGYFLNQFLAPRTNKRTDEWGGSAANRRRLPLEIVRRIRAAVGPEFILIFRLSMAELVEGGQTFAEIRELARELERAGATIINTDIGWHEARVPTIVTSVPRAAFVEFTAKIAREVSIPVCASNRINMPEVAEEILTRGDAQLISLARPLLADPDWVAKAAGGREDEINTCIACNQACLDHAFQRKTVSCLLNPRAGHETDLVLAPTRRTKHIAVVGAGPAGLAAAVNLAERGHRVDLFEAEDRIGGQFDIARRIPGKEEFEETLRYFDRMIAKTGVRLHLNTRATAEDLLAARYDEVVLATGVRPRVPDIPGIDHPMVLTYAELVREAKPVGRRVAVIGAGGIGFDVGEFLTVDGHPTLKLDEWKQEWGVDADDERAPGQLRAPRPAPAAREVVLLQRKDSPFGRSLGKTTGWVHRAALRAKGVEQVGGVNYERIDDEGLHISFGERRARPRVIRVDNVVVCAGQESVRELAEPLRAAGVRVHLIGGAELAAELDAKRAIDQGTRLAARL GT:EXON 1|1-676:0| BL:SWS:NREP 1 BL:SWS:REP 3->676|FADH_ECOLI|0.0|52.0|669/672| SEG 230->244|aeirelareleraga| SEG 379->395|avvgagpaglaaavnla| SEG 497->510|vgrrvavigaggig| SEG 542->557|rapgqlraprpapaar| BL:PDB:NREP 1 BL:PDB:REP 3->676|1ps9A|0.0|52.0|669/671| RP:PDB:NREP 1 RP:PDB:REP 2->676|1djqA|4e-59|20.7|647/729| RP:PFM:NREP 3 RP:PFM:REP 7->329|PF00724|2e-59|45.1|319/340|Oxidored_FMN| RP:PFM:REP 398->451|PF00070|2e-04|48.8|43/78|Pyr_redox| RP:PFM:REP 461->484|PF07992|3e-04|66.7|24/275|Pyr_redox_2| HM:PFM:NREP 2 HM:PFM:REP 7->332|PF00724|1.8e-84|38.1|323/341|Oxidored_FMN| HM:PFM:REP 378->519|PF07992|7e-20|36.0|139/202|Pyr_redox_2| GO:PFM:NREP 5 GO:PFM GO:0010181|"GO:FMN binding"|PF00724|IPR001155| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00724|IPR001155| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00070|IPR001327| GO:PFM GO:0050660|"GO:FAD binding"|PF00070|IPR001327| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00070|IPR001327| RP:SCP:NREP 3 RP:SCP:REP 5->342|1z41A1|4e-66|28.6|332/337|c.1.4.1| RP:SCP:REP 333->487|1ps9A3|9e-25|47.7|153/179|c.4.1.1| RP:SCP:REP 471->632|1ps9A2|1e-47|38.4|159/162|c.3.1.1| HM:SCP:REP 4->362|1vjiA_|2e-108|43.4|343/361|c.1.4.1|1/1|FMN-linked oxidoreductases| HM:SCP:REP 333->529|1ps9A3|9.8e-46|41.1|180/0|c.4.1.1|1/2|Nucleotide-binding domain| HM:SCP:REP 463->655|1djnA2|7.8e-25|34.4|151/0|c.3.1.1|2/2|FAD/NAD(P)-binding domain| OP:NHOMO 2771 OP:NHOMOORG 793 OP:PATTERN ------1111111121----1--31111-121-----------11----1221--------111---- 211-21122221-261122-23--2722222154444BJF14-23-212221223325--2-614-756531111111--522-1-1-1111-------1-2-2-91211---------------1--232----111111---1-5122221--11------1--13231------------21211---21222222232122222221223222311112213333332322222222222222222221-13-11----112--11---1311--1111-----------------1111111111111211---1112-1366222222322312BB1-1-3-1-11-1--754131-7-1334-1-13118331-----525671-131222222222221-3-44543534344-6332223455554422112522224553333333334222412------------------------------25C1128514ABEADE5666577A8777818F796696125571111153574232313434211-----11142219641-1-13---1-111142342111113-21121---------------------1143453-734513555537533333544365---1---------23462552333233322-322233223233322222356575332122222222221212241222222--322333322333---1-----122213443111215---------776683743351AA9A788C6B8875A69---------13566333335452256343443331-----11441111--------2-1------1111---111-11--------1-1-----211 ----753-841-1236A889877EGE62311111111222222333757EFLLJ78432233635123-75861D2211269998813-5UAA5J64442323CJA-33C---------------------------------2---------------------------57---321----1278I968721PJRP1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 676 STR:RPRED 100.0 SQ:SECSTR cGGGGGGGccEEETTEEEcccEEEcccccccTTTcTcHHHHHHHHHHHHHTTccEEEEEEEEccTTcccTcccEEcccHHHHHHHHHHHHHHHHTTcEEEEEEEccGGGccTTccEEcccccccccTTccEEccHHHHHHHHHHHHHHHHHHHHHTccEEEEEEcTTcHHHHHHcTTTcccccTTcccHHHHHHHHHHHHHHHHHHHTTTcEEEEEEEEEccccTTccTTTHHHHHHHHHTTTccEEEEEEcccTTGGGTcccTTTccTTHHHHHHHHTTccccEEEccccccHHHHHHHHHTTccccEEEcHHHHHcTTHHHHHHTTcGGGccccccccHHHHHHHHccccccccccTTTTTHHHHccccccccccccccEEEEEcccHHHHHHHHHHHHTcEEEEEcccccTTTTHHHHTTcTTcGGGGHHHHHHHHHHHHHHTTcTTcHHHHHTccccEEEEcccEEEccccccTTTccccTTcHHHHcTTcTTEEcHHHHHHTccccccEEEEEEcccccHHHHHHHHHHHTTTTccGGGccTTcccccccccEEEEEEccccTTTHHHHTTcHHHHHHHHHHTTcEEEETEEEEEEETTETTccccccccccEEEEccEEEEEccEEEccHHHHHHHTTccEEEEcGHHGGTccccHHHHHHHHHHHHHTT DISOP:02AL 1-2| PSIPRED ccccccccccEEEccEEEccEEEEccccccccccccccHHHHHHHHHHHccccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHcccEEEEEEccccccccccccccccccHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHcccccEEEEcHHHHHcHHHHHHHHHHcccccEEcccccEEEcccccccccHHHHHHHHHHHHccccccccccccEEEEEEccHHHHHHHHHHHHcccEEEEEEccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEccEEcHHHHHHHcccEEEEEcccEEccccccccccccEEEHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccccccccccHHHHHccccHHHHcccccEEEEEEEccccHHHHccHHHHHHHHHHHHHcccEEEEcEEEEEEEccccEEEEEEccccEEEEEEEEEEEEEcccccHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHHHHc //