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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56144.1
DDBJ      :             putative aminotransferase
Swiss-Prot:             

Homologs  Archaea  67/68 : Bacteria  768/915 : Eukaryota  190/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:418 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->397 1szsA PDBj 4e-37 32.0 %
:RPS:PDB   14->397 3dodB PDBj 3e-57 24.2 %
:RPS:SCOP  16->397 1d7rA  c.67.1.4 * 2e-56 27.5 %
:HMM:SCOP  1->416 1qj5A_ c.67.1.4 * 8.9e-107 42.5 %
:RPS:PFM   26->313 PF00202 * Aminotran_3 1e-52 47.7 %
:HMM:PFM   28->359 PF00202 * Aminotran_3 6.6e-72 35.6 326/339  
:BLT:SWISS 1->397 ECTB_NOCFA e-159 71.0 %
:PROS 265->274|PS00599|AA_TRANSFER_CLASS_2
:PROS 236->272|PS00600|AA_TRANSFER_CLASS_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56144.1 GT:GENE BAD56144.1 GT:PRODUCT putative aminotransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1452271..1453527 GB:FROM 1452271 GB:TO 1453527 GB:DIRECTION + GB:PRODUCT putative aminotransferase GB:PROTEIN_ID BAD56144.1 LENGTH 418 SQ:AASEQ MSVAETTVFDQLESNVRGYCRSWPAVFDTARGCVLRDEQGREYLDFFAGAGALNYGHNNPVLKRALLDYLARDGITHGLDMSTVAKRGLLEALRDLVLTPRGLDYKVQFPGPTGANAVEAALKLARKVTGRHAVLNFTNAFHGMSLGALSVTGNAAKRAGAGVPLPHATPMPYDGYLGDGDGLTWMARMLDDPSSGLDRPAAVIVETVQGEGGVNVAGAAWLRALAELCRTRGILLIVDDVQMGCGRTGPFFSFEAAGITPDIVTLSKSISGYGLPLALVLFRPELDQWAPGEHNGTFRGNNHAFVTARVALEHYWSDDALERGTAARAATTRAALERIAAAVPGLGVRGRGLVQGLVFADASRAAKVCRAAFDRGLLVETSGSMDEVVKLIPPLTVAEDELAHGLELLGAAVEAVCG GT:EXON 1|1-418:0| BL:SWS:NREP 1 BL:SWS:REP 1->397|ECTB_NOCFA|e-159|71.0|397/436| PROS 265->274|PS00599|AA_TRANSFER_CLASS_2|PDOC00518| PROS 236->272|PS00600|AA_TRANSFER_CLASS_3|PDOC00519| SEG 173->183|ydgylgdgdgl| SEG 320->342|alergtaaraattraaleriaaa| SEG 345->358|glgvrgrglvqglv| SEG 398->416|aedelahglellgaaveav| BL:PDB:NREP 1 BL:PDB:REP 17->397|1szsA|4e-37|32.0|375/425| RP:PDB:NREP 1 RP:PDB:REP 14->397|3dodB|3e-57|24.2|360/416| RP:PFM:NREP 1 RP:PFM:REP 26->313|PF00202|1e-52|47.7|279/336|Aminotran_3| HM:PFM:NREP 1 HM:PFM:REP 28->359|PF00202|6.6e-72|35.6|326/339|Aminotran_3| GO:PFM:NREP 2 GO:PFM GO:0008483|"GO:transaminase activity"|PF00202|IPR005814| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00202|IPR005814| RP:SCP:NREP 1 RP:SCP:REP 16->397|1d7rA|2e-56|27.5|374/431|c.67.1.4| HM:SCP:REP 1->416|1qj5A_|8.9e-107|42.5|405/429|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 4671 OP:NHOMOORG 1025 OP:PATTERN 33221232333333431323222221141233122122121111121112343154523222227-22 48448323444241D6655-5B226E555555E99948DD678733341434644434119483C6DEEC71111111--226342332322-322-1-424356525241------1-12222-33332333323666861115743432243333333333324354523333333333335453411-768999998887A898887A66768AB65565443222337835555554555555556626-------2---2222-----231111-------111------------------------1--111----25255-------1-162663---3-2--422342243423333222221143235551111165B695545566466666564656-236216274I62D77899F89DBC66432488546657944444444644234562112211122---------------2122214543BCCB9EGGEEF99997DDCEBBBB68BDD667612669687338585986623324853333333443374-46662443352243333433554332358564123222222122111111134323336643556344785555456555555555651-1455321-11166983766665655566-66666556666566666659A98A8C35555455555555555754255552-434444344444--2322222444445788444323322223123888776734477AABBAGAF8GEEA7BDF3----1---554445666668655554444544433333322111111------------------------------------1221112111542 11--433-1---1132765647475946633334445333233434355797A83664445234533653222364213344343423-35273334344464554-42242342342223323632535M4-4442411533452143222132854424935243544H43423552a332567ABE5765463747 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 397 STR:RPRED 95.0 SQ:SECSTR ccccHHHHHHHHHccHHHHHHcccccEEEEEcTEEEETTccEEEETTHHHHTcccccccHHHHHHHHHHHTTcccccccccccHHHHHHHHHHHHHHHccTTEEEcEEEEEccHHHHHHHHHHHHHHHHHHTTcEEETTccEEEEEccEEEccccGGGcccccHHHHHHHHHHHTTcccccHHHHHHHHHHHHGGGETTEEEEEEccEEcTTTcEEccTTHHHHHHHHHHHTTcEEEEEcTTTTTTTTccccGGGGGTccccEEEEcGGGGTTccccEEEETcccGGGccccccccTTTTcHHHHHHHHHHHHHHHHTTHHHHHHHHHHTcTTEEEEEEETTEEEEEEcccTTTcccccGGGcHHHHHHHHHHHTTEEccEETEETTEEEEcccTTc##################### DISOP:02AL 1-3| PSIPRED cccHHHHHHHHHccccHHccccccEEEEEccccEEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHccccHHccccccccccEEEcccccccccHHHHHHHHHHHHHHHHccccEEEEEEEEEccccccccccHHHHHHHHHHHHHcccEEEEEcccccccHHHHccEEEccccEEEEEEEEHHHHccccEEEEEEEcHHHHHcccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccEEEEEEEEccHHHHHHHHHHHHHcccEEEEccccccEEEEcccccccHHHHHHHHHHHHHHHHHHcc //