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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56149.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.40.4
:89 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->57 3eivC PDBj 4e-06 43.8 %
:RPS:PDB   10->57 3eivC PDBj 9e-06 43.8 %
:HMM:SCOP  10->57 1se8A_ b.40.4.3 * 0.00049 30.4 %
:HMM:PFM   10->57 PF00436 * SSB 0.00015 28.3 46/104  
:HMM:PFM   51->87 PF10243 * MIP-T3 0.00019 37.8 37/538  
:BLT:SWISS 10->57 SSB2_STRCO 1e-05 43.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56149.1 GT:GENE BAD56149.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1457989..1458258 GB:FROM 1457989 GB:TO 1458258 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56149.1 LENGTH 89 SQ:AASEQ MSPIRASGLPVTRQLAHGEQVLTFRMASTARRLDHATGEWLDSGTLYLTVSCRRRRAGPVALRPAAPQARRHRARRESGDAEYSGGIER GT:EXON 1|1-89:0| BL:SWS:NREP 1 BL:SWS:REP 10->57|SSB2_STRCO|1e-05|43.8|48/199| SEG 59->76|pvalrpaapqarrhrarr| BL:PDB:NREP 1 BL:PDB:REP 10->57|3eivC|4e-06|43.8|48/111| RP:PDB:NREP 1 RP:PDB:REP 10->57|3eivC|9e-06|43.8|48/111| HM:PFM:NREP 2 HM:PFM:REP 10->57|PF00436|0.00015|28.3|46/104|SSB| HM:PFM:REP 51->87|PF10243|0.00019|37.8|37/538|MIP-T3| HM:SCP:REP 10->57|1se8A_|0.00049|30.4|46/0|b.40.4.3|1/1|Nucleic acid-binding proteins| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 48 STR:RPRED 53.9 SQ:SECSTR #########cEEEEcTTccEEEEEEEEEccEEEETTTTEEEEcccEEEEEEEETHHH################################ DISOP:02AL 1-6, 66-83, 87-89| PSIPRED ccccccccccHHHHHHccccEEHHHHHHHHHHHHccccccccccEEEEEEEccccccccEEEcccccHHHHHHHHcccccccccccccc //