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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56159.1
DDBJ      :             putative globin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  239/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.1.1
:134 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->133 1ngkB PDBj 3e-53 71.8 %
:RPS:PDB   10->131 1dlwA PDBj 1e-20 20.4 %
:RPS:SCOP  10->134 1ngkA  a.1.1.1 * 1e-19 71.2 %
:HMM:SCOP  9->134 1ngkA_ a.1.1.1 * 4.6e-39 39.7 %
:RPS:PFM   12->113 PF01152 * Bac_globin 5e-15 47.1 %
:HMM:PFM   10->128 PF01152 * Bac_globin 4.6e-35 37.0 119/120  
:BLT:SWISS 10->133 GLBO_MYCTU 8e-53 71.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56159.1 GT:GENE BAD56159.1 GT:PRODUCT putative globin GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1470610..1471014 GB:FROM 1470610 GB:TO 1471014 GB:DIRECTION + GB:PRODUCT putative globin GB:PROTEIN_ID BAD56159.1 LENGTH 134 SQ:AASEQ MSSGEQTATSFYEAVGGAETFRRLVAAFYREVAADEILRPLYPEEDLGPAERRLRMFLEQYWGGPRTYSDERGHPRLRMRHMPFKVGPLERDAWLRCMRIAVAELEPEVLDDEHRKALLDYLEMAAHSLMNSPI GT:EXON 1|1-134:0| BL:SWS:NREP 1 BL:SWS:REP 10->133|GLBO_MYCTU|8e-53|71.8|124/128| BL:PDB:NREP 1 BL:PDB:REP 10->133|1ngkB|3e-53|71.8|124/127| RP:PDB:NREP 1 RP:PDB:REP 10->131|1dlwA|1e-20|20.4|113/116| RP:PFM:NREP 1 RP:PFM:REP 12->113|PF01152|5e-15|47.1|102/120|Bac_globin| HM:PFM:NREP 1 HM:PFM:REP 10->128|PF01152|4.6e-35|37.0|119/120|Bac_globin| GO:PFM:NREP 2 GO:PFM GO:0015671|"GO:oxygen transport"|PF01152|IPR001486| GO:PFM GO:0019825|"GO:oxygen binding"|PF01152|IPR001486| RP:SCP:NREP 1 RP:SCP:REP 10->134|1ngkA|1e-19|71.2|125/126|a.1.1.1| HM:SCP:REP 9->134|1ngkA_|4.6e-39|39.7|126/0|a.1.1.1|1/1|Globin-like| OP:NHOMO 250 OP:NHOMOORG 239 OP:PATTERN -------------------------------------------------------------------- --1-21111111-111111-11111111111111111121121211111111111111--111-1112111-----------------------------------11----------------------------11111------------------------------------------111-----1111111111111111111111111111111111------1111111111111111111111------------------------------------------------------------------------------------------------------------------------1-----------12122-----------------------------1--11111111111111------------------------------------------------------------1---111111111111111111111111111221111-111111-1112111-111111111---------1-111---------------------------11---------------------------11---1-----1-1111111-111111111-1------1------------------------------------------------------------------------------------------------------1--1--------------------------1--------------1-------------------------------------------------1-------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 128 STR:RPRED 95.5 SQ:SECSTR #####cccccHHHHTTcHHHHHHHHHHHHHHHHTcTTTGGGGTTccHHHHHHHHHHHHHHHTTccccccccccccHHHHHHTTccccHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHTTHHHHcccc# DISOP:02AL 1-10| PSIPRED ccccccccccHHHHHccHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHccccHHHHccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccc //