Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56169.1
DDBJ : putative ferredoxin reductase
Swiss-Prot:
Homologs Archaea 40/68 : Bacteria 449/915 : Eukaryota 136/199 : Viruses 0/175 --->[See Alignment]
c.3.1
d.87.1
:406 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 8->406 1q1wB PDBj 4e-43 30.9 %
:RPS:PDB 8->402 1d7yA PDBj 2e-25 30.1 %
:RPS:SCOP 5->135 1fcdA1 c.3.1.5 * 8e-11 21.3 %
:RPS:SCOP 180->282 1d5tA1 c.3.1.3 * 3e-09 21.4 %
:RPS:SCOP 317->406 1q1rA3 d.87.1.1 * 1e-19 36.8 %
:HMM:SCOP 1->194 1gv4A1 c.3.1.5 * 4.9e-50 44.0 %
:HMM:SCOP 105->319 1mo9A1 c.3.1.5 * 2.3e-32 38.1 %
:HMM:SCOP 315->406 1q1rA3 d.87.1.1 * 1.2e-22 43.8 %
:RPS:PFM 71->281 PF07992 * Pyr_redox_2 4e-08 34.4 %
:HMM:PFM 7->282 PF07992 * Pyr_redox_2 1.8e-46 36.1 194/202
:BLT:SWISS 8->401 THCD_RHOER 8e-47 33.8 %
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56169.1
GT:GENE BAD56169.1
GT:PRODUCT putative ferredoxin reductase
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION complement(1481060..1482280)
GB:FROM 1481060
GB:TO 1482280
GB:DIRECTION -
GB:PRODUCT putative ferredoxin reductase
GB:PROTEIN_ID BAD56169.1
LENGTH 406
SQ:AASEQ MTSDRRFVIVGGGLAAATLAQELRAADFPDSITLIGAEEHLPYERPPLSKEFLFGKKQLADFTVEPAQWYRDHHVELLLGTTVTGLDPRARTVTLPDGSTLPYDKLALATGSTPRRLPVPGADAPGVYTLRTIDDARALAGLFARGRLAIVGAGWIGLEVAAAARAADCAVTVVETAPQPLMGPLGPEMGAVFADLHRAHGVDLRLGARLDAVTTGADGAVTGLALADGGTVAADAVLMAVGAAPNIALAADAGLAVGTGVLVDASLRTSDPDIVAVGDIAEQAHPRLGGRIRVEHWANALNQPAVAAATMLGRAAEYDRLPYFFTDQYDLGMEYTGYATADRTARVVVRGSLADREFVAFWLDAENRVLAGMNVNVWDVTDRIKELITSATPVDPDRLADPTQPM
GT:EXON 1|1-406:0|
BL:SWS:NREP 1
BL:SWS:REP 8->401|THCD_RHOER|8e-47|33.8|390/427|
SEG 14->26|laaatlaqelraa|
SEG 77->86|lllgttvtgl|
SEG 136->149|aralaglfargrla|
SEG 160->174|vaaaaraadcavtvv|
SEG 232->244|vaadavlmavgaa|
SEG 298->309|analnqpavaaa|
BL:PDB:NREP 1
BL:PDB:REP 8->406|1q1wB|4e-43|30.9|395/421|
RP:PDB:NREP 1
RP:PDB:REP 8->402|1d7yA|2e-25|30.1|382/401|
RP:PFM:NREP 1
RP:PFM:REP 71->281|PF07992|4e-08|34.4|195/275|Pyr_redox_2|
HM:PFM:NREP 1
HM:PFM:REP 7->282|PF07992|1.8e-46|36.1|194/202|Pyr_redox_2|
RP:SCP:NREP 3
RP:SCP:REP 5->135|1fcdA1|8e-11|21.3|127/186|c.3.1.5|
RP:SCP:REP 180->282|1d5tA1|3e-09|21.4|98/336|c.3.1.3|
RP:SCP:REP 317->406|1q1rA3|1e-19|36.8|87/103|d.87.1.1|
HM:SCP:REP 1->194|1gv4A1|4.9e-50|44.0|193/0|c.3.1.5|1/2|FAD/NAD(P)-binding domain|
HM:SCP:REP 105->319|1mo9A1|2.3e-32|38.1|197/0|c.3.1.5|2/2|FAD/NAD(P)-binding domain|
HM:SCP:REP 315->406|1q1rA3|1.2e-22|43.8|89/103|d.87.1.1|1/1|FAD/NAD-linked reductases, dimerisation (C-terminal) domain|
OP:NHOMO 1251
OP:NHOMOORG 625
OP:PATTERN ---1--11111222111-11111311111211111111----1--------1-1-1--1-1-1-1--- --3161-2222---52222-26--33222221656556FH2211122-21--224-2---1-811397443-111------11-----1111--11-----1--1-1-------------------1---------111--11111-------------------------------------2-111-1--22111112-21222211312212221-2---22-------31111111111111111111-111-11-1---22--------------------------------------------------------11-212222-2---2-11---11-2111-1-11133122121122213-----24222-----433224321112211111-11111-33333455141-322344733455144212131111211---------11116-1------------------------------1342-4432244546525555664555451562A2652121113412213334111321-1---------2225411132-2--11211------22-5111211313-------------------------223131511-1-------111----1-1--2-----1-1------112-1--2221211122-222221-112212222221312-111----------1------21111122---------------------------35222---------------4343424-1-2-21212131331421122---------11--1-----21-22---1211---------11--------------1-------------------------------11-111-1- -----11-1---111221112231112111111111111111111111111236121121-1------------------------11-1212111-1-1111111-1-1244333-11--11133-2-6A2-213-11--1111-111------2122132-21117-2-11211221911112434318311----- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 405
STR:RPRED 99.8
SQ:SECSTR #cccEEEEEEcccHHHHHHHHHHHHHTccccEEEEEcccccccccGGGGTTHHHHccGGGccHHHHccGGGcTTcEEEETccEEEEETTTTEEEETTccEEEccEEEEcccEEEcccGGGTTccccEEEcccHHHHHHHHHHccTTcEEEEcccHHHHHHHHHHHHTTcEEEEEEccccTTTTTccHHHHHHHHHHHHTTTcEEEEcccEEEEETTEEEEEEEETTTTccEEEccEEEEcccEEEccHHHHHTTccccccEEccTTcccccTTEEEcGGGEEEEcTTTccEEEcccHHHHHHHHHHHHHHHHcTccccccccEEEEEETTEEEEEEEcccccEETEEEEEccccccEEEEEEEcTETTEEEEEEEEccHHHHHHHHHHHTTccccHHHHHccccTH
DISOP:02AL 1-3, 403-406|
PSIPRED cccccEEEEEcccHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHHcccccHHHHHcccHHHHHHcccEEEEccEEEEEcccEEEEEEccccEEEEEEEEEEcccEEEEccccccccccEEEEccHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHHHHcccEEEEccEEEEEEEccccEEEEEEEccccEEEEEEEEEEEccEEcHHHHHHccEEEccEEEEccccccccccEEEEEEEEEcccccccccEEcccHHHHHHHHHHHHHHHcccccccccccEEEEEEcccEEEEEEccccccccEEEEEEccccccEEEEEEEcccEEEEEEEEccHHHHHHHHHHHHccccccHHHHccccccc
//
[GTOP]
