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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56170.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  64/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:213 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   9->173 1bedA PDBj 9e-07 17.0 %
:RPS:SCOP  11->171 1r4wA  c.47.1.13 * 3e-14 19.1 %
:HMM:SCOP  10->173 1r4wA_ c.47.1.13 * 1.4e-22 31.2 %
:RPS:PFM   11->166 PF01323 * DSBA 8e-04 39.1 %
:HMM:PFM   11->171 PF01323 * DSBA 1.7e-10 24.2 149/193  
:BLT:SWISS 11->211 Y2286_MYCTU 1e-17 32.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56170.1 GT:GENE BAD56170.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1482459..1483100 GB:FROM 1482459 GB:TO 1483100 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56170.1 LENGTH 213 SQ:AASEQ MTETGKKDVADFWFDPLCPWCWITSRWILEVEKVRDIEARFHVMSLAVLNEGRDLPEQYAELMRSGWGPVRVAIAAAQQHGDKVLAPLYTAMGTRIHDRRADYERGSTEETLRAVIADALAETGLPAELAAAADSTDYDEALRASHHAGMDKVGPDVGTPTIHVNGVAFFGPVLSRIPRGEDAGKVWDGVVALASYPHFFELKRTRTEGPVFD GT:EXON 1|1-213:0| BL:SWS:NREP 1 BL:SWS:REP 11->211|Y2286_MYCTU|1e-17|32.6|190/230| RP:PDB:NREP 1 RP:PDB:REP 9->173|1bedA|9e-07|17.0|141/181| RP:PFM:NREP 1 RP:PFM:REP 11->166|PF01323|8e-04|39.1|138/178|DSBA| HM:PFM:NREP 1 HM:PFM:REP 11->171|PF01323|1.7e-10|24.2|149/193|DSBA| GO:PFM:NREP 2 GO:PFM GO:0015035|"GO:protein disulfide oxidoreductase activity"|PF01323|IPR001853| GO:PFM GO:0030288|"GO:outer membrane-bounded periplasmic space"|PF01323|IPR001853| RP:SCP:NREP 1 RP:SCP:REP 11->171|1r4wA|3e-14|19.1|152/221|c.47.1.13| HM:SCP:REP 10->173|1r4wA_|1.4e-22|31.2|154/0|c.47.1.13|1/1|Thioredoxin-like| OP:NHOMO 80 OP:NHOMOORG 64 OP:PATTERN -------------------------------------------------------------------- ---1111111111121111-1111312121222222211111-11111111-11111211122-2111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 169 STR:RPRED 79.3 SQ:SECSTR ####ccccEEEEEEcTTcHHHHHHHHHHHHHHHTccTTcEEEEEEcccccGGGHHHHHHHEcccccTTHHHHHHHHHTTcHHHHHHHHHHHHHHHHTcccTTHTTcccccccHHHHHHHHHTTTccHHHHHHHTcHHHHHHHHHHHHHHHHHHTccTcccEEEETTTEEEcGG######################################## DISOP:02AL 1-6, 206-213| PSIPRED cccccccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHHcccccccEEEEccEEEEccEEccccccHHHHHHHHHHHHHHccccEEEEEcccccccccc //