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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56175.1
DDBJ      :             putative phosphoketolase
Swiss-Prot:PHK_NOCFA    RecName: Full=Probable phosphoketolase;         EC=4.1.2.-;

Homologs  Archaea  0/68 : Bacteria  202/915 : Eukaryota  63/199 : Viruses  0/175   --->[See Alignment]
c.36.1c.48.1
:822 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   76->794 1ay0A PDBj 2e-39 15.3 %
:RPS:SCOP  37->369 1l8aA1  c.36.1.10 * 3e-21 16.8 %
:RPS:SCOP  406->616 1ay0A2  c.36.1.6 * 1e-14 17.6 %
:HMM:SCOP  24->400 1l8aA1 c.36.1.10 * 6.1e-69 32.9 %
:HMM:SCOP  406->620 1trkA2 c.36.1.6 * 1.8e-30 22.2 %
:HMM:SCOP  623->773 1itzA3 c.48.1.1 * 1.2e-05 18.5 %
:RPS:PFM   42->415 PF09364 * XFP_N e-149 65.8 %
:RPS:PFM   427->603 PF03894 * XFP 1e-73 67.8 %
:RPS:PFM   614->818 PF09363 * XFP_C 2e-74 63.5 %
:HMM:PFM   39->414 PF09364 * XFP_N 3.7e-176 60.4 376/379  
:HMM:PFM   614->818 PF09363 * XFP_C 7.6e-95 61.6 203/203  
:HMM:PFM   427->603 PF03894 * XFP 9e-83 63.3 177/179  
:BLT:SWISS 1->822 PHK_NOCFA 0.0 100.0 %
:PROS 19->29|PS00133|CARBOXYPEPT_ZN_2
:PROS 174->180|PS60002|PHOSPHOKETOLASE_1
:PROS 187->205|PS60003|PHOSPHOKETOLASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56175.1 GT:GENE BAD56175.1 GT:PRODUCT putative phosphoketolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1487629..1490097) GB:FROM 1487629 GB:TO 1490097 GB:DIRECTION - GB:PRODUCT putative phosphoketolase GB:PROTEIN_ID BAD56175.1 LENGTH 822 SQ:AASEQ MTQMASAGGDTSADNVGAHGGRTVAPVPYELTEAAGPLDRAELAALDAWWRAANYLSVGQIYLMANPLLTEPLRPEHIKPRLLGHFGTVPGLNLVWTHANRVIRQRGLDAVFVAGPGHGGPGPNACAWLEGTYSELYSHIPRDGEGMAALFAQFSFPGGVPSHCAPETPGSFHEGGELGYSLLHAYGAALDNPDLTVFCVIGDGEAETGPLATSWHGNKFLNPGRDGAVLPILALNEYKIANPTLFARIPEPELINLLEGYGHEPIVVAGDDPGVVHQRLAAAMDTCMNRIAQIQRAARDGADGSRPAWPMIVLRTPKGWTCPPVVDGDRVEGTFRAHQVPLPAARTDDGHRAVLEQWLRSYRPEELFDDRGRPVPELLALAPEGDRRMSANPVANGGALVRDLRLPDWREFGVEVKTPGGSTHEATRVLGGWLREVTRLNPHNFLTFAPDELASNRLQDILEVTGRDWQAEVGEYDVALDRSGRVIEVLSEHICQGLLEGYLLTGRHGVFTCYEAFIHIVDAMFNQHAKWLDASAAVPWRRPLASLNYLLSSHVWRQDHNGFTHQDPGFLDVVLNKKPEIVRVYLPPDANTLLSTYDHCLRSRHYVNVVVAGKQPQEDWLSVEQAAVHCARGLGIWEWACHNDDPGTTPDVVLACAGDVPTLETLAAAAILRDRLPRLRVRVINVVDLMRLLPAEEHPHGLPDREFDTLFTTASPIIFAFHGYPWLIHRLTYRRTNHDGLHVRGYKEEGTTTTPFDMVMLNDLDRYHLVMDVIDRVPGLRETAAGLRQEMVDARWRARAWTREHGADIPVVADWTWPEPSR GT:EXON 1|1-822:0| SW:ID PHK_NOCFA SW:DE RecName: Full=Probable phosphoketolase; EC=4.1.2.-; SW:GN OrderedLocusNames=NFA_13300; SW:KW Complete proteome; Lyase; Thiamine pyrophosphate. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->822|PHK_NOCFA|0.0|100.0|822/822| GO:SWS:NREP 1 GO:SWS GO:0016829|"GO:lyase activity"|Lyase| PROS 19->29|PS00133|CARBOXYPEPT_ZN_2|PDOC00123| PROS 174->180|PS60002|PHOSPHOKETOLASE_1|PDOC60002| PROS 187->205|PS60003|PHOSPHOKETOLASE_2|PDOC60002| SEG 115->123|gpghggpgp| SEG 672->683|lrdrlprlrvrv| RP:PDB:NREP 1 RP:PDB:REP 76->794|1ay0A|2e-39|15.3|639/678| RP:PFM:NREP 3 RP:PFM:REP 42->415|PF09364|e-149|65.8|374/378|XFP_N| RP:PFM:REP 427->603|PF03894|1e-73|67.8|177/179|XFP| RP:PFM:REP 614->818|PF09363|2e-74|63.5|203/203|XFP_C| HM:PFM:NREP 3 HM:PFM:REP 39->414|PF09364|3.7e-176|60.4|376/379|XFP_N| HM:PFM:REP 614->818|PF09363|7.6e-95|61.6|203/203|XFP_C| HM:PFM:REP 427->603|PF03894|9e-83|63.3|177/179|XFP| GO:PFM:NREP 4 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF03894|IPR005593| GO:PFM GO:0016832|"GO:aldehyde-lyase activity"|PF03894|IPR005593| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF09363|IPR018969| GO:PFM GO:0016832|"GO:aldehyde-lyase activity"|PF09363|IPR018969| RP:SCP:NREP 2 RP:SCP:REP 37->369|1l8aA1|3e-21|16.8|285/402|c.36.1.10| RP:SCP:REP 406->616|1ay0A2|1e-14|17.6|193/197|c.36.1.6| HM:SCP:REP 24->400|1l8aA1|6.1e-69|32.9|340/415|c.36.1.10|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 406->620|1trkA2|1.8e-30|22.2|194/197|c.36.1.6|1/1|Thiamin diphosphate-binding fold (THDP-binding)| HM:SCP:REP 623->773|1itzA3|1.2e-05|18.5|135/136|c.48.1.1|1/1|TK C-terminal domain-like| OP:NHOMO 321 OP:NHOMOORG 265 OP:PATTERN -------------------------------------------------------------------- 1-1-1--2------111----1--11-----1111121111112-111111-111-----111-2-1111111111111--------------------------1------------------111-1---11-1----------12121111111----1--1112311-----------------11----------------------------------------------------------------11112111112211111211221--111----1---------------------------------------1------------------------------------------------1---------1-1112211111-11111111111-23122212211-1---11121112-----------------------111----------------------------------------------------------11--------1------------1--1--1----12-----------111--1------1-----------------1111-----------------------------12--1--------1111111111111111111---1---------------------------------------------------------------------------------------------------------1---1-----------------------------------1--1--1-------------------------------------------------------------------11--1--------------------1---1-- --------------111111222222211111111111111111112222232222112221------------------------11-12-111-22221-1--------------------------------------------------------------------------------------1--1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 764 STR:RPRED 92.9 SQ:SECSTR ############################cccGGGcccccHHccTTcccccccEEEEEccEEEcTTcEEEEEEEEEHHHHHHTccccHHHHHHHHHHHHHHHTccccTTcTTcTTccEEEEccGGGHHHHHHHHHHHHHHHTTccccHHHHTTTTcTTccccccccTTcTTcccccccTTHHHHHHHHHHHccccccEEEEEcHHHHHcHHHHHHHHHHHHHHHTTcTTEEEEEEEccEETTEEGGGGGTccccHHHHHHHHTcEEEEEccTTTcHHHHHHHHHHHTTcHHTccEEEEEcccccTcTTccEEEEEEccTTTTcTTTTcGGGTcccccHHHHHHHHHHHHHHHHTTccTTccccccHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHTTTcccTTGGGGcccccTTcccEEHHHHHHHHHHHHTEEEEEcccHHHHTcccTTccEEccGGGccEETHHHHHTTccEEEcccHHHHHHHHHHHHHHcTEEEEETcEEEEEEEHHHHGGGHHHHHHHHHHTcccTTcccEEEEEcccGGGcTTcTTcccccHHHHHHHTcccccEEEccccHHHHHHHHHHHHHcccccEEEEccccEEccccTTccHHHHTTccEEEEcccccccccEccccEEEEEcTTHHHHHHHHHHHHHHHHHTTccEEEEEcccHHHHHTccHHHHHHHccTTccEEEEcccccGGGGGTccEEGGTccEEEccccEcccccccccccccHHHHHHHHTccHHHHHHHHHHHHH##HHTTcccccTTccc############################ DISOP:02AL 1-13, 697-699, 820-822| PSIPRED ccccccccccccccccccccccccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHcccHHHcccccccHHHHHHHHHHccccccccccccccccccEEcccHHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccEEEcccccHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccHHHHccccccHHHHHHHHHHHHHHHHccccccccccHHHccccccHHcccccccccccHHHHHHHHHHHHHHHHHHcHHHcEEccccccccccHHHHHHHHccccccccccccccccccccEEEEEcHHHHHHHHHHHHHHccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccEEEEcccccccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHccccEEEEEEccccccccccHHHHHHHHHcccEEEEEEEccccccccccEEEEEEccHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHcccccccccccHHHHHHHccccccEEEEEcccHHHHHHHHcccccccEEEEEEEEcccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccc //