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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56181.1
DDBJ      :             putative anti-anti-sigma factor
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  2/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.13.2
:125 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->100 1tilD PDBj 2e-05 27.2 %
:RPS:PDB   18->125 1auzA PDBj 5e-10 22.3 %
:RPS:SCOP  14->120 1vc1A  c.13.2.1 * 8e-11 20.6 %
:HMM:SCOP  9->121 1h4xA_ c.13.2.1 * 1.1e-13 32.7 %
:HMM:PFM   20->99 PF01740 * STAS 1.1e-10 26.2 80/117  
:BLT:SWISS 27->100 SP2AA_BACCO 2e-04 28.4 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56181.1 GT:GENE BAD56181.1 GT:PRODUCT putative anti-anti-sigma factor GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1495617..1495994 GB:FROM 1495617 GB:TO 1495994 GB:DIRECTION + GB:PRODUCT putative anti-anti-sigma factor GB:PROTEIN_ID BAD56181.1 LENGTH 125 SQ:AASEQ MSMAATPRVRVSVTTPSDAVTLCAVAGEVDHFSADEFRAQLLTALRPGVPGLVIDLSRVAFFGVAGLHALFEARALAEDADIRVRVVTGPPCVTRLLDISRRLAHAPEPGFEVVHSLADALLETR GT:EXON 1|1-125:0| BL:SWS:NREP 1 BL:SWS:REP 27->100|SP2AA_BACCO|2e-04|28.4|74/116| BL:PDB:NREP 1 BL:PDB:REP 20->100|1tilD|2e-05|27.2|81/118| RP:PDB:NREP 1 RP:PDB:REP 18->125|1auzA|5e-10|22.3|103/116| HM:PFM:NREP 1 HM:PFM:REP 20->99|PF01740|1.1e-10|26.2|80/117|STAS| RP:SCP:NREP 1 RP:SCP:REP 14->120|1vc1A|8e-11|20.6|102/110|c.13.2.1| HM:SCP:REP 9->121|1h4xA_|1.1e-13|32.7|107/111|c.13.2.1|1/1|Anti-sigma factor antagonist SpoIIaa| OP:NHOMO 2 OP:NHOMOORG 2 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1---------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 113 STR:RPRED 90.4 SQ:SECSTR #######ccEEEEEccTTTEEEEcccccccTTHHHHHHHHHHHHHcccccEEEEEccccccccTTHHHHHHHHHHHHHHHTccccEEcccTTTTHHHHHHccG#####GGTcccccGGGTGGGTc DISOP:02AL 1-4| PSIPRED cccccccEEEEEEcccccEEEEEEEccEEEcccHHHHHHHHHHHHHccccEEEEEcccccEEccHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHccccccEEEcccHHHHHHcc //