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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56182.1
DDBJ      :             putative 3-ketosteroid-5-isomerase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.17.4
:126 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->115 1ocvA PDBj 1e-19 44.3 %
:RPS:PDB   2->125 1e3vB PDBj 2e-17 36.3 %
:RPS:SCOP  2->118 1ocvA  d.17.4.3 * 3e-16 40.5 %
:HMM:SCOP  1->124 1qjgA_ d.17.4.3 * 7.5e-27 29.3 %
:RPS:PFM   9->89 PF02136 * NTF2 2e-06 32.5 %
:HMM:PFM   9->116 PF02136 * NTF2 7.3e-14 21.9 105/118  
:BLT:SWISS 1->126 SDIS_NOCSI 2e-20 42.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56182.1 GT:GENE BAD56182.1 GT:PRODUCT putative 3-ketosteroid-5-isomerase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1496068..1496448) GB:FROM 1496068 GB:TO 1496448 GB:DIRECTION - GB:PRODUCT putative 3-ketosteroid-5-isomerase GB:PROTEIN_ID BAD56182.1 LENGTH 126 SQ:AASEQ MTQKIRDTIERYVELVGSGPTQGIVDLYTEDATVEDPIGTPLRRGHDAIREFYSVFESLDRSTELRTDTVRIAGNHAAFMFDVVTVHGDQRFTVTPIDVMEFDEDGRIVRMRAYWNPEQDMRAEPA GT:EXON 1|1-126:0| BL:SWS:NREP 1 BL:SWS:REP 1->126|SDIS_NOCSI|2e-20|42.3|123/123| BL:PDB:NREP 1 BL:PDB:REP 9->115|1ocvA|1e-19|44.3|106/125| RP:PDB:NREP 1 RP:PDB:REP 2->125|1e3vB|2e-17|36.3|124/129| RP:PFM:NREP 1 RP:PFM:REP 9->89|PF02136|2e-06|32.5|77/115|NTF2| HM:PFM:NREP 1 HM:PFM:REP 9->116|PF02136|7.3e-14|21.9|105/118|NTF2| GO:PFM:NREP 2 GO:PFM GO:0005622|"GO:intracellular"|PF02136|IPR002075| GO:PFM GO:0006810|"GO:transport"|PF02136|IPR002075| RP:SCP:NREP 1 RP:SCP:REP 2->118|1ocvA|3e-16|40.5|116/125|d.17.4.3| HM:SCP:REP 1->124|1qjgA_|7.5e-27|29.3|123/125|d.17.4.3|1/1|NTF2-like| OP:NHOMO 34 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- --------------122----1--11-----111112321----------------------1---1----------------------------------------------------------------------------------------------------11-----------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------21-------------------------------111--------------------------------------------------------------------------------------------------------------------1------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 125 STR:RPRED 99.2 SQ:SECSTR HHHHHHHHHHHHHHHHHHTcHHHHHHTEEEEEEEEccTTcccEEcHHHHHHHHHHccccccEEEEccccEEccccEEEEEEEEEEEETTEEEEEEEEEEEEEcTTccEEEEEEEccGGGEEcccc# DISOP:02AL 124-126| PSIPRED ccHHHHHHHHHHHHHHHcccHHHHHHHHccccEEEcccccccEEcHHHHHHHHHHHHccccEEEEEEccEEEEccEEEEEEEEEEEcccEEEEEEEEEEEEEcccccEEEEEEEEcccHHHccccc //