[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56185.1
DDBJ      :             putative formate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  42/68 : Bacteria  525/915 : Eukaryota  13/199 : Viruses  0/175   --->[See Alignment]
b.52.2c.81.1
:769 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   121->494 1fdiA PDBj 1e-37 32.8 %
:RPS:PDB   77->769 1e60A PDBj 1e-80 16.8 %
:RPS:SCOP  65->733 1h0hA2  c.81.1.1 * 2e-76 18.3 %
:HMM:SCOP  59->650 1kqfA2 c.81.1.1 * 1.3e-141 33.5 %
:HMM:SCOP  639->762 1g8kA1 b.52.2.2 * 8.2e-17 27.4 %
:RPS:PFM   121->494 PF00384 * Molybdopterin 9e-38 33.4 %
:HMM:PFM   121->494 PF00384 * Molybdopterin 4.1e-26 24.2 351/432  
:HMM:PFM   648->754 PF01568 * Molydop_binding 6.3e-12 30.3 99/109  
:BLT:SWISS 9->761 Y2924_MYCBO 0.0 69.2 %
:PROS 569->592|PS00075|DHFR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56185.1 GT:GENE BAD56185.1 GT:PRODUCT putative formate dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1498100..1500409) GB:FROM 1498100 GB:TO 1500409 GB:DIRECTION - GB:PRODUCT putative formate dehydrogenase GB:PROTEIN_ID BAD56185.1 LENGTH 769 SQ:AASEQ MHRKGPTEDIDESALTVSPPKEQAAGVTAVAVALKRSVEEMGVLRTARTLTRVNQAHGFDCPGCAWPEPSGHRRPAEFCENGAKAVAEEATLRTVTPEFFAAHPVAELAGKSGYWLGQQGRLTHPMVLRPGGTHYEPIGWDEAYRLIAAELRALDSPDEAVFYTSGRTANETAFLYQLLVRSFGTNNLPDCSNMCHESSGTALIGSIGIGKGSVTIDDFARADLIIVAGQNPGTNHPRMLSALAGAKANGARIVAVNPLPETGLLGFRDPQTVRGLTTGVDLADDFLQIRLGGDMALFQGLGRLLLEAEDHAPGTVVDREFVERDCAGFAAYEKHLRQVDLHTVRTATGLTHEQLHHAAGLLAEAERVIVCWAMGLTQHKHAVATIEEATNLLLMRGMIGKPGAGLCPVRGHSNVQGDRTMGIWEKMPESFLDALDREFGITSPRKHGYDTVEAIRAMRAGRAKVFVGMGGNFVSATPDTEVTEAALRSCSLTVQVSTKLNRSHVVHGRTALILPTLGRTDEDIRGGVRQQVSVEDSMSMVHLSTGRLRPVSEHLRSEVAIVCELALALFGPEHPVPWARFRDDYDTIRDAIARVVPGCAHYNVRVRQRNGFVLPHPPRDQREFRTGTGKANFAVNDLTWVPVPEGRLVLQTLRSHDQYNTTIYGLDDRYRGIHNGRKVVLVHPADIAEFGFTDGDLVDLVSEWTDGVERRVRGFRLVAYSTPRGNAAAYYPETNPLVPLDHVAERSNTPVSKAVTIRLEPHVHAEAPA GT:EXON 1|1-769:0| BL:SWS:NREP 1 BL:SWS:REP 9->761|Y2924_MYCBO|0.0|69.2|753/779| PROS 569->592|PS00075|DHFR_1|PDOC00072| SEG 352->366|heqlhhaagllaeae| BL:PDB:NREP 1 BL:PDB:REP 121->494|1fdiA|1e-37|32.8|348/714| RP:PDB:NREP 1 RP:PDB:REP 77->769|1e60A|1e-80|16.8|653/778| RP:PFM:NREP 1 RP:PFM:REP 121->494|PF00384|9e-38|33.4|350/423|Molybdopterin| HM:PFM:NREP 2 HM:PFM:REP 121->494|PF00384|4.1e-26|24.2|351/432|Molybdopterin| HM:PFM:REP 648->754|PF01568|6.3e-12|30.3|99/109|Molydop_binding| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656| RP:SCP:NREP 1 RP:SCP:REP 65->733|1h0hA2|2e-76|18.3|657/812|c.81.1.1| HM:SCP:REP 59->650|1kqfA2|1.3e-141|33.5|559/817|c.81.1.1|1/1|Formate dehydrogenase/DMSO reductase, domains 1-3| HM:SCP:REP 639->762|1g8kA1|8.2e-17|27.4|117/0|b.52.2.2|1/1|ADC-like| OP:NHOMO 1301 OP:NHOMOORG 580 OP:PATTERN ------21212222222-------3---2-231-11-122221121453--1-12113231122---- 1-213--1111---22111-12--231111112222223422221---1---424--2--1-2-1143631--------35112-2-2-------------1--1212----------------------------11121---1-222122211111-121111122222------------11-11---2-32222222212222222244132211211--1111111211111111111111111--111----------------------------------------------------------------------11-1-----------2---111----13--22552223-214-------1122221-----245341-3232431111111-1-1-6646666733--444344236432332-13233322323--------411-33-1-----------------------------1-222-222145445444555555565555255486554-355435233323353451133331----------331-5614222211222--22121313-1--1427211--1111-1---------24222223212134-2-32333314553333354335----3--------43451422222211222-122222222222222222135455--31121-1211113332131111111--211111111111-------------41142---112-1----11-22222121111223225432344443343---------12223-1111342331113233111------1-11------------------------------------------1-------22- -------------1----1111-1-1---------------------------1-1-1---------------------------------------------------------------------------------------------------------1------------------------3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 740 STR:RPRED 96.2 SQ:SECSTR #########################EEEHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccTTEEEEEEccEEEEEEETTEEEEEEEEEEEEEEcTTcccccTTHHHHHHHHHcTTccccccEEEHHHHHHEEEccHHHHHHHHHHHHHHHHcGGGEEcccccccccHHHHHHHHHHHTTcEcccccTTHHHHHHHHTccHHccTTcccccHHHHHHHccEEEEEcccHHHHTTTHHHHHHHHHHTTcEEEEEcccccHHHHHHcccccTcccHHHHHHTcEEEcccTTcHHHHHHHHHHHHHHTTccHHHHcccHHHHHHHEEcHHHHHHHHTTTcHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEccGGGccTTTHHHHHHHHHHHHHHTcTTcTTcEEEccTTcTccccccccTTccccccGcccEEEGGGHHHHHHcTTcEEEETTEEEEcccccEEEEEcccHHHHcccHHHHHHHGGGccEEEEEEccccHHHHGHHTccEEEEcccGGGccE####EEEEEcTTTccEEEEEcccccccTTTcccHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHTTTcccccHHHHcHHHHHHTEEEcccccGGGHHHTcTTccccccccccccccTTcTTEEEEccccccccTTcTTTcGGGGGTccTTccEEEEcHHHHHTTTccTTcEEEEEccccTTccTTETTcccccccTTcTTcccccccGGGTcccccccTTTccccTTccEEEEEEEccccccc DISOP:02AL 1-21, 762-769| PSIPRED ccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEcccEEEEEccccccccccccccHHHHHcccccccccEEEEccccccEEccHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHccHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEcHHHHHccHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHcccEEEEEEEcccHHHHcccHHHHHHHHccccEEEEEcccccccHHHHccccEEccccHHHHHHHccccccEEEEEEcccEEEEccHHHcccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHccccccccccccccccccccccEEEEEEccccccccccccEEEEcccccccccccEEccccHHHHHHccccEEEEcHHHHHHHccccccEEEEEEccccEEEEEEEccEEEEccccccEEEccccccccccccccccccccccccccEEEEEEEcccccccc //