Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56185.1
DDBJ : putative formate dehydrogenase
Swiss-Prot:
Homologs Archaea 42/68 : Bacteria 525/915 : Eukaryota 13/199 : Viruses 0/175 --->[See Alignment]
b.52.2
c.81.1
:769 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 121->494 1fdiA PDBj 1e-37 32.8 %
:RPS:PDB 77->769 1e60A PDBj 1e-80 16.8 %
:RPS:SCOP 65->733 1h0hA2 c.81.1.1 * 2e-76 18.3 %
:HMM:SCOP 59->650 1kqfA2 c.81.1.1 * 1.3e-141 33.5 %
:HMM:SCOP 639->762 1g8kA1 b.52.2.2 * 8.2e-17 27.4 %
:RPS:PFM 121->494 PF00384 * Molybdopterin 9e-38 33.4 %
:HMM:PFM 121->494 PF00384 * Molybdopterin 4.1e-26 24.2 351/432
:HMM:PFM 648->754 PF01568 * Molydop_binding 6.3e-12 30.3 99/109
:BLT:SWISS 9->761 Y2924_MYCBO 0.0 69.2 %
:PROS 569->592|PS00075|DHFR_1
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56185.1
GT:GENE BAD56185.1
GT:PRODUCT putative formate dehydrogenase
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION complement(1498100..1500409)
GB:FROM 1498100
GB:TO 1500409
GB:DIRECTION -
GB:PRODUCT putative formate dehydrogenase
GB:PROTEIN_ID BAD56185.1
LENGTH 769
SQ:AASEQ MHRKGPTEDIDESALTVSPPKEQAAGVTAVAVALKRSVEEMGVLRTARTLTRVNQAHGFDCPGCAWPEPSGHRRPAEFCENGAKAVAEEATLRTVTPEFFAAHPVAELAGKSGYWLGQQGRLTHPMVLRPGGTHYEPIGWDEAYRLIAAELRALDSPDEAVFYTSGRTANETAFLYQLLVRSFGTNNLPDCSNMCHESSGTALIGSIGIGKGSVTIDDFARADLIIVAGQNPGTNHPRMLSALAGAKANGARIVAVNPLPETGLLGFRDPQTVRGLTTGVDLADDFLQIRLGGDMALFQGLGRLLLEAEDHAPGTVVDREFVERDCAGFAAYEKHLRQVDLHTVRTATGLTHEQLHHAAGLLAEAERVIVCWAMGLTQHKHAVATIEEATNLLLMRGMIGKPGAGLCPVRGHSNVQGDRTMGIWEKMPESFLDALDREFGITSPRKHGYDTVEAIRAMRAGRAKVFVGMGGNFVSATPDTEVTEAALRSCSLTVQVSTKLNRSHVVHGRTALILPTLGRTDEDIRGGVRQQVSVEDSMSMVHLSTGRLRPVSEHLRSEVAIVCELALALFGPEHPVPWARFRDDYDTIRDAIARVVPGCAHYNVRVRQRNGFVLPHPPRDQREFRTGTGKANFAVNDLTWVPVPEGRLVLQTLRSHDQYNTTIYGLDDRYRGIHNGRKVVLVHPADIAEFGFTDGDLVDLVSEWTDGVERRVRGFRLVAYSTPRGNAAAYYPETNPLVPLDHVAERSNTPVSKAVTIRLEPHVHAEAPA
GT:EXON 1|1-769:0|
BL:SWS:NREP 1
BL:SWS:REP 9->761|Y2924_MYCBO|0.0|69.2|753/779|
PROS 569->592|PS00075|DHFR_1|PDOC00072|
SEG 352->366|heqlhhaagllaeae|
BL:PDB:NREP 1
BL:PDB:REP 121->494|1fdiA|1e-37|32.8|348/714|
RP:PDB:NREP 1
RP:PDB:REP 77->769|1e60A|1e-80|16.8|653/778|
RP:PFM:NREP 1
RP:PFM:REP 121->494|PF00384|9e-38|33.4|350/423|Molybdopterin|
HM:PFM:NREP 2
HM:PFM:REP 121->494|PF00384|4.1e-26|24.2|351/432|Molybdopterin|
HM:PFM:REP 648->754|PF01568|6.3e-12|30.3|99/109|Molydop_binding|
GO:PFM:NREP 1
GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656|
RP:SCP:NREP 1
RP:SCP:REP 65->733|1h0hA2|2e-76|18.3|657/812|c.81.1.1|
HM:SCP:REP 59->650|1kqfA2|1.3e-141|33.5|559/817|c.81.1.1|1/1|Formate dehydrogenase/DMSO reductase, domains 1-3|
HM:SCP:REP 639->762|1g8kA1|8.2e-17|27.4|117/0|b.52.2.2|1/1|ADC-like|
OP:NHOMO 1301
OP:NHOMOORG 580
OP:PATTERN ------21212222222-------3---2-231-11-122221121453--1-12113231122---- 1-213--1111---22111-12--231111112222223422221---1---424--2--1-2-1143631--------35112-2-2-------------1--1212----------------------------11121---1-222122211111-121111122222------------11-11---2-32222222212222222244132211211--1111111211111111111111111--111----------------------------------------------------------------------11-1-----------2---111----13--22552223-214-------1122221-----245341-3232431111111-1-1-6646666733--444344236432332-13233322323--------411-33-1-----------------------------1-222-222145445444555555565555255486554-355435233323353451133331----------331-5614222211222--22121313-1--1427211--1111-1---------24222223212134-2-32333314553333354335----3--------43451422222211222-122222222222222222135455--31121-1211113332131111111--211111111111-------------41142---112-1----11-22222121111223225432344443343---------12223-1111342331113233111------1-11------------------------------------------1-------22- -------------1----1111-1-1---------------------------1-1-1---------------------------------------------------------------------------------------------------------1------------------------3-----1---- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 740
STR:RPRED 96.2
SQ:SECSTR #########################EEEHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccTTEEEEEEccEEEEEEETTEEEEEEEEEEEEEEcTTcccccTTHHHHHHHHHcTTccccccEEEHHHHHHEEEccHHHHHHHHHHHHHHHHcGGGEEcccccccccHHHHHHHHHHHTTcEcccccTTHHHHHHHHTccHHccTTcccccHHHHHHHccEEEEEcccHHHHTTTHHHHHHHHHHTTcEEEEEcccccHHHHHHcccccTcccHHHHHHTcEEEcccTTcHHHHHHHHHHHHHHTTccHHHHcccHHHHHHHEEcHHHHHHHHTTTcHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEccGGGccTTTHHHHHHHHHHHHHHTcTTcTTcEEEccTTcTccccccccTTccccccGcccEEEGGGHHHHHHcTTcEEEETTEEEEcccccEEEEEcccHHHHcccHHHHHHHGGGccEEEEEEccccHHHHGHHTccEEEEcccGGGccE####EEEEEcTTTccEEEEEcccccccTTTcccHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHTTTcccccHHHHcHHHHHHTEEEcccccGGGHHHTcTTccccccccccccccTTcTTEEEEccccccccTTcTTTcGGGGGTccTTccEEEEcHHHHHTTTccTTcEEEEEccccTTccTTETTcccccccTTcTTcccccccGGGTcccccccTTTccccTTccEEEEEEEccccccc
DISOP:02AL 1-21, 762-769|
PSIPRED ccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEcccEEEEEccccccccccccccHHHHHcccccccccEEEEccccccEEccHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHccHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEcHHHHHccHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHcccEEEEEEEcccHHHHcccHHHHHHHHccccEEEEEcccccccHHHHccccEEccccHHHHHHHccccccEEEEEEcccEEEEccHHHcccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHccccccccccccccccccccccEEEEEEccccccccccccEEEEcccccccccccEEccccHHHHHHccccEEEEcHHHHHHHccccccEEEEEEccccEEEEEEEccEEEEccccccEEEccccccccccccccccccccccccccEEEEEEEcccccccc
//
[GTOP]
