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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56202.1
DDBJ      :             putative peptidase
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  465/915 : Eukaryota  48/199 : Viruses  6/175   --->[See Alignment]
e.3.1
:359 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   53->338 1ikgA PDBj 2e-54 42.8 %
:RPS:PDB   56->357 2dnsF PDBj 7e-46 31.2 %
:RPS:SCOP  56->357 1ei5A3  e.3.1.1 * 1e-49 23.8 %
:HMM:SCOP  20->350 2drwA1 e.3.1.1 * 3.7e-78 38.7 %
:RPS:PFM   56->357 PF00144 * Beta-lactamase 1e-33 45.1 %
:HMM:PFM   31->339 PF00144 * Beta-lactamase 4e-62 36.8 291/329  
:BLT:SWISS 53->338 DAC_STRSR 6e-54 42.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56202.1 GT:GENE BAD56202.1 GT:PRODUCT putative peptidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1522998..1524077) GB:FROM 1522998 GB:TO 1524077 GB:DIRECTION - GB:PRODUCT putative peptidase GB:PROTEIN_ID BAD56202.1 LENGTH 359 SQ:AASEQ MLVGLCVGSTLLLVGCSTVQRASALQRDLDAVTAAGVAGAVATVDDRTTSLVITSGVADRSTGAAMPEHGRVRIGSVTKTFTAAIVMQLVAEGKVALDAAVDTYLPGLLTGDGVDGRVITVRQLLHHRSGLPEFAGRPGADELIAAAENRTLAPVEAVSTALAHPAQFAPGTRYAYTNTNYIVLGLLIERVTGRSYADELRDRIIAPLGLTDTYLPAPGEREIRGEHPHGYLDTPDGVIDVSRIEPSIPWAAGALVSTGRDLNIFWRALVDGRLVPAPQLAEMTTPQDGASEDEGRGYGLGVGATELSCGVRYVGHSGGIPGYHTMSGATPDRAATITFTQAPRTPPDSKALLEHALCP GT:EXON 1|1-359:0| BL:SWS:NREP 1 BL:SWS:REP 53->338|DAC_STRSR|6e-54|42.8|276/406| TM:NTM 3 TM:REGION 1->21| TM:REGION 26->48| TM:REGION 79->101| SEG 28->49|dldavtaagvagavatvddrtt| BL:PDB:NREP 1 BL:PDB:REP 53->338|1ikgA|2e-54|42.8|276/345| RP:PDB:NREP 1 RP:PDB:REP 56->357|2dnsF|7e-46|31.2|282/300| RP:PFM:NREP 1 RP:PFM:REP 56->357|PF00144|1e-33|45.1|286/324|Beta-lactamase| HM:PFM:NREP 1 HM:PFM:REP 31->339|PF00144|4e-62|36.8|291/329|Beta-lactamase| RP:SCP:NREP 1 RP:SCP:REP 56->357|1ei5A3|1e-49|23.8|286/333|e.3.1.1| HM:SCP:REP 20->350|2drwA1|3.7e-78|38.7|318/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 1269 OP:NHOMOORG 531 OP:PATTERN 11---1-----------11--------1----------------22-2--1---1-1----------- 2AG1B1-1------41-44-43--3844444-65551A77-2-16525-22-312-13--2311734986--------1-1-1-----22---------2-631B5-628---------------11-11-111--12256----3-12411-----------12-1122-------------2-111-----377979C9D5D89A98223322AAB1-142-1111121E81111111111111111111-13314411-2-43--441--1-1-------1-11--------------------------8----------2111---12224113111----2----3----11---3-2---------9-4C66B-----12A7721-3354411111111111-21233221112-2---121111--1--3A1221-11-1311111111-112-1------------111111111111--1-----2224------11223312222224-2222117111122--22--3---2--121-------11-----------11-21------12----121112-------55-2-------------------------11---2111253-111112---112211-2--------1------2111--11111111-11-11111--1111-1--1--2-1--132-11111111111111111------1--211111111111---2121112232--2---------------------------11332313-1111111423---------1-21-------1-2-97423222221111----1111-------------------------------------------------5- -----1--------112-2-12222-2------3321222222----115526---1-1111--1---------1-----------------2---------------4-A-----------------------------------------------1----22------221---------------1----4-211 --------------1----------------------------------------------------------------------------1-111------1------------------------------------------------------------------------ STR:NPRED 307 STR:RPRED 85.5 SQ:SECSTR ##################################################cccEEHcccccccccccTTccEEcGGGGHHHHHHHHHHHHHHTcccTTccGGGTcTTcTTGGGcccTTccGGGGTTTcccccccGGGcccccHHHHHHcccccHHHHHHHHHHHcccccTTcccccccHHHHHHHHHHHHHHcccHHHHHHHHTTTTTTcTTcEETTTTccccGGGccccEEcccTTccccccccGGGTGGGTcEEEcHHHHHHHHHHHHTTccccHHHHHHHHTccEEcccTTcEccccEEEEETEETTEEEEEEEEEETTEEEEEEEETTTccEEEEEEcccccccTHHHHHHHH## DISOP:02AL 358-360| PSIPRED cHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccEEEEEEEcccEEEEEEEEEEEcccccccccccEEEEHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccccccccccccHHHHHHcccccccccccccHHHHHHccccccccHHHHHHHHHHcccccccccEEEEccccHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccHHHHHHHHcccccccccccEEcccccccccccccccEEEcHHHHHHHHHHHHccccccHHHHHHHHcccccccccccccEEEEEEEEEcccccEEEEEccccccEEEEEEEEccccEEEEEEEccccccHHHHHHHHHccc //