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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56209.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  57/68 : Bacteria  736/915 : Eukaryota  184/199 : Viruses  1/175   --->[See Alignment]
c.2.1
:326 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   107->323 3hg7A PDBj 4e-29 39.0 %
:RPS:PDB   43->320 3ba1A PDBj 6e-43 30.9 %
:RPS:SCOP  107->287 1hkuA1  c.2.1.4 * 3e-31 30.5 %
:HMM:SCOP  103->290 2nacA1 c.2.1.4 * 1.2e-49 41.6 %
:RPS:PFM   110->287 PF02826 * 2-Hacid_dh_C 3e-30 46.2 %
:HMM:PFM   114->287 PF02826 * 2-Hacid_dh_C 1.8e-50 39.1 169/178  
:BLT:SWISS 33->326 YPRB2_CORML 2e-50 42.4 %
:PROS 228->244|PS00671|D_2_HYDROXYACID_DH_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56209.1 GT:GENE BAD56209.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1529560..1530540) GB:FROM 1529560 GB:TO 1530540 GB:DIRECTION - GB:PRODUCT putative dehydrogenase GB:PROTEIN_ID BAD56209.1 LENGTH 326 SQ:AASEQ MSETGEEVRTVNQTVVPIAIGPTGHTPAMLEKAISDGGAKLVDLDAARALIWVGSAAEFPQRLPETVEWVQLPAAGVEDWFALGVFDRHPGVRFTSAAGAFAASVAEHTLALLLAGVRYLPEHLRATSWRQQDFFPHVGTLRGKTVTIVGAGGIGRALIPMLVPLGAHIIAVNRSGRPVTGPDIPDTIETVPAEHLAKVWPRTDHVVVAAPATADTRHLIDADVLARLRPSSWLVNVARGSLVDTDALVTALTDGTIAGAALDVTDPEPLPDGHPLWSLPNAMITPHDSNPPQLRFAAFADHVAENVTRFVAGTPLLAPIDTDRGY GT:EXON 1|1-326:0| BL:SWS:NREP 1 BL:SWS:REP 33->326|YPRB2_CORML|2e-50|42.4|283/304| PROS 228->244|PS00671|D_2_HYDROXYACID_DH_3|PDOC00063| SEG 97->106|aagafaasva| BL:PDB:NREP 1 BL:PDB:REP 107->323|3hg7A|4e-29|39.0|205/310| RP:PDB:NREP 1 RP:PDB:REP 43->320|3ba1A|6e-43|30.9|265/312| RP:PFM:NREP 1 RP:PFM:REP 110->287|PF02826|3e-30|46.2|169/176|2-Hacid_dh_C| HM:PFM:NREP 1 HM:PFM:REP 114->287|PF02826|1.8e-50|39.1|169/178|2-Hacid_dh_C| GO:PFM:NREP 2 GO:PFM GO:0016616|"GO:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"|PF02826|IPR006140| GO:PFM GO:0048037|"GO:cofactor binding"|PF02826|IPR006140| RP:SCP:NREP 1 RP:SCP:REP 107->287|1hkuA1|3e-31|30.5|177/193|c.2.1.4| HM:SCP:REP 103->290|2nacA1|1.2e-49|41.6|185/0|c.2.1.4|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 4046 OP:NHOMOORG 978 OP:PATTERN 2221112---------3322211152233261111111222212121-12221133333331111-22 2251832333311344411-141149111114444423CD2413634122228B6333--33424686B8322221221-223-12331111-122---22313332513-----------------111---11-333451112322114422222111111122222521111111211113223344212222222222222222233433322234447112222232327777776777777773345324444341-1443346112466111222-------------------------------1---------231573232332222215522224211142241561111321288411224145335-----67DCD3245979555555554557-6797586CEA5-FFF798ACBABFA744144867798372222222245531333-----------------------------2346335866C9CCAB84444488FB777766B6F8BDA-47764578684D5CB542-2--22--111113321213232---2211221123233234733222324-122122222211-------121-111335462223324443435433333335343--11222------24554343334344423-33345443433433333336B7452233433333333333333744322231-533333333333--12-----333223365222324-2222222222322242229266666ACB49889388711111311122333555554443323232332231111--12222222--------11-----------1--------------323322422223- ----242-63--1428AB7AAB9C9C956554476759777676666549C9II7BB88766E4623424325464323557769922-7D6A463A8C8716555-382CA8A99611-12415B1A39S7-668122-81233-21215--53B56945635843E58621962543u23458B9GJ88555HCHD5 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- STR:NPRED 302 STR:RPRED 92.6 SQ:SECSTR #######################TGHHHHHHHHHHHHHccTTHTTTEEEEEEccccHHHHHHcTTTccEEEEccccccTTccHHHHHHHTTcEEEccccTTHHHHHHHHHHHHHHHHTTHHHHHHTTGGGGccccccccccTTccEEEEcccHHHHHHHHHHHTTTccEEEEcccccTHHHHHTTETcccEEEccHHHHHHTccEEEEcccccGGGTTcccHHHHHHHcTTcEEEEcccGGGccHHHHHHHHHHTcccEEEEcccTTTTcccHGGGGGcTTEEEccccTTccHHHHHHHHHHHHHHHHHHHHTcccccccccccc# DISOP:02AL 1-2| PSIPRED cccHHHHHHHHHHHccccccccccccHHHHHHHHccccHHHHcccccEEEEEccccHHHHHHHHHcccEEEEEEccccccccHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEcccEEEEEEccHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHcccEEcccHHHHHHHccEEEEEccccHHHHHcccHHHHHHcccccEEEEccccccccHHHHHHHHHcccEEEEEEEcccccccccccHHHccccEEEccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccc //