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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56214.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  297/915 : Eukaryota  81/199 : Viruses  1/175   --->[See Alignment]
d.261.1
:405 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   27->405 1uc2A PDBj 2e-30 32.3 %
:RPS:SCOP  8->405 1uc2A  d.261.1.1 * e-101 31.4 %
:HMM:SCOP  15->405 1uc2A_ d.261.1.1 * 2.7e-122 43.9 %
:RPS:PFM   19->405 PF01139 * UPF0027 7e-78 46.3 %
:HMM:PFM   11->405 PF01139 * UPF0027 6.8e-131 43.4 392/420  
:BLT:SWISS 6->405 RTCB_ECOLI 1e-86 47.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56214.1 GT:GENE BAD56214.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1534409..1535626) GB:FROM 1534409 GB:TO 1535626 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56214.1 LENGTH 405 SQ:AASEQ MFPVELSGARARTLMWAHEDEIEAAALQQLRNIARLDWVHGVRVMPDVHLGKGATVGSVIAMRDAVAPAAVGVDIGCGMESVRTDLTAADLPDDLRSLRSRIEAAVPVGFAAHKDAVQVRKLAARPSGVTTATLRTGWERFWAEFGALDERVTGREAKAHKQMGTLGGGNHFIEVCLDQDDQVWILLHSGSRNIGKELAERHMEVARRLPHNQHLVDRDLAVFLAGTPEMAAYRHDLTWAQEYAARNRAVMLALVCQAIREEFPAREVRFDEPISCHHNYVAEEIVDGMPMLVTRKGAVRAGAGDLALIPGSMGTRSYVVRGKGNPASFQSASHGAGRRMSRNAAKRQFSVADLVAQTEGVESRKDAGVLDEIPAAYKNIDEVIEAQRDLVDVVATLRQVLCVKG GT:EXON 1|1-405:0| BL:SWS:NREP 1 BL:SWS:REP 6->405|RTCB_ECOLI|1e-86|47.9|390/408| SEG 84->95|tdltaadlpddl| BL:PDB:NREP 1 BL:PDB:REP 27->405|1uc2A|2e-30|32.3|378/480| RP:PFM:NREP 1 RP:PFM:REP 19->405|PF01139|7e-78|46.3|382/396|UPF0027| HM:PFM:NREP 1 HM:PFM:REP 11->405|PF01139|6.8e-131|43.4|392/420|UPF0027| RP:SCP:NREP 1 RP:SCP:REP 8->405|1uc2A|e-101|31.4|398/480|d.261.1.1| HM:SCP:REP 15->405|1uc2A_|2.7e-122|43.9|385/480|d.261.1.1|1/1|Hypothetical protein PH1602| OP:NHOMO 549 OP:NHOMOORG 447 OP:PATTERN 11111111111111111111111111111211111111111111111111111111111111111111 -1--1111111------11-1-----11111-----1211-1-11-1-1----11--1--13--1111111---------1-11-1--111----------2---21111---------------11-------1-111111112111211111---------1---111-------------2-11111----11111-11-1111-111----111---1-11-1111121------------------------------------------------------------------------------------------1-111-----------1--------1--1---1111-1-111--1111---12------------22-------------------------1------1----1--------------------1---------------------------------------------------1----111111--------------13--111-----2-----31111---11---2---------11-111211-121-11111-11111112111114511--------------------------------1-----------------------1---1111-------1-1---1112122222-1112222232122111112---131111-21212122211112-21-2221-------------------1-1111111-2-----------------11121----11-2223231-1-1------------------------------1111111----------1--------------1---------------------------11-11111111-1 22--111-4111--1-------------------------------------------------------------------------------------------12-21111121-11111111-1-291-111--111-1121111-1111-11111321211-111111111111911112------1-1----2 ----------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 404 STR:RPRED 99.8 SQ:SECSTR #EEEcccTTcccEEEEccHHHHHHHHHHHHHHHTTcTTccccEEEEEEEccccccEEEEEEETcEEcGGGTcccTTcEEEEEcccccHHHHGGGHHHHHHHHHHHccccTTccHHHHHHHHHHHHHTTcccGGGGGGcGGGGccTTccGGGccHHHHHHGGGccccccTTcEEEEEEEETTcEEEEEEEccHHHHHHHHHHHHHHHHHHGGGcccccTTcccEETTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTcccEEEEEEcEEEEEEEETTEEEEEEEEcEEEcTTccEEEEcccTTccEEEEEccHHHHcccEEEccccccccHHHHHHHccEHHHHHHHTTcEEEEccHHHHTcGGGcccHHHHHHHHHTccEEEEEEEEEEEEEc PSIPRED cccEEcccccccEEEEcccccccHHHHHHHHHHHHcccEEEEEEcccccccccccEEEEEEEccEEEcccEEEccccEEEEEEccccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHcccccHHHHccccHHHHHHHccccccccHHHHcccccccccccccEEEEEEEEccccEEEEEEccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccEEEEEEEccEEEEEEcccccccccccEEEEccccccEEEEEEccccHHHHccccccHHHHHHHHHHHHcccHHHHHHHHccEEEccccccHHccHHHcccHHHHHHHHHHHHEEEEEEEEEEEEcc //