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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56218.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  74/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.62.1
:471 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   285->425 1auqA PDBj 1e-08 15.6 %
:RPS:SCOP  285->425 1auqA  c.62.1.1 * 3e-09 14.8 %
:HMM:SCOP  296->420 1n3yA_ c.62.1.1 * 6.6e-05 25.8 %
:RPS:PFM   268->430 PF05762 * VWA_CoxE 5e-21 38.9 %
:HMM:PFM   249->464 PF05762 * VWA_CoxE 7.8e-54 34.0 212/222  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56218.1 GT:GENE BAD56218.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1538925..1540340 GB:FROM 1538925 GB:TO 1540340 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56218.1 LENGTH 471 SQ:AASEQ MNPEAPVSLRSEHGLPGHLVGFVEALRARGIPVGPSETVDAGRVVTVLDLLDREVLREGLACALLRRTTHRATFDGLFDLWFPVAVGERAEDEADLELPRKPSGEVDIPALRQLLADLLVREDSDRQLEQVAAQLVEQLGQYQSARGPSFSAYQALKEVQPQTLLAKILAGLAVGPDTSEFDTEIARRAARGRIDGFRATVEAETRRRVAERIGRERVANYGVARQAEDVDFLRASDRELAELRRGTQRLARVLASRLAARRRKHRRGEIDLRKTLRKSMSTGGVPIDLVNRKPRPGRPELVLLCDVSGSVAGFSNFTLLLVSALREQFSRVRIFAFVDNTDEVTRFFDPHTQLDEAMTRIFTEADVVGYDGHSDYGTALRTFAAEFPDAVTSRSSLLILGDARTNYRDPALDTLRELVEVAKHAHWLNPEPTNQWGSGDSAAEKYRTIIEMHECRSARQLTEVVSRLLPV GT:EXON 1|1-471:0| SEG 185->219|iarraargridgfratveaetrrrvaerigrerva| SEG 249->267|rlarvlasrlaarrrkhrr| RP:PDB:NREP 1 RP:PDB:REP 285->425|1auqA|1e-08|15.6|135/208| RP:PFM:NREP 1 RP:PFM:REP 268->430|PF05762|5e-21|38.9|157/192|VWA_CoxE| HM:PFM:NREP 1 HM:PFM:REP 249->464|PF05762|7.8e-54|34.0|212/222|VWA_CoxE| RP:SCP:NREP 1 RP:SCP:REP 285->425|1auqA|3e-09|14.8|135/208|c.62.1.1| HM:SCP:REP 296->420|1n3yA_|6.6e-05|25.8|120/0|c.62.1.1|1/1|vWA-like| OP:NHOMO 99 OP:NHOMOORG 77 OP:PATTERN --------------------------------121--------------------------------- ---1----------11111-11--1211111121112222-111------------------1---11--------------------------------------------------------------------22212---11------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------332-1---22-------------1-------112---1-111----------------------2-------1---11---1-2------1-2--------------1----------------------------------------------------------------1------111----------------------------------111-----------------1----1-111------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 185 STR:RPRED 39.3 SQ:SECSTR ############################################################################################################################################################################################################################################################################################ccccccccccccccEEEEEEEEccTTccHHHHHHHHHHHTccccTTcEEEEEEEEEcccEEEEEcTTccccHHHHHHHHHTccccccccccHHHHHHHTTccccccTTcEEEEEEEEcccccGGGGHHHHHTTHHHHHHHHEEEEEcHHHHTTcccHHHHHHHHHHcEEEEccHHHHHHHHHHHH## DISOP:02AL 1-4, 96-129, 137-153, 173-193, 256-267| PSIPRED cccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccHHcccccccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHcccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHccEEEEHHHcccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHHHHHccEEEEEcccHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccc //