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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56224.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  25/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.23.10
:413 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   182->412 3bzwB PDBj 2e-16 12.7 %
:RPS:SCOP  180->412 3bzwA1  c.23.10.9 * 3e-16 14.2 %
:HMM:SCOP  178->412 1vjgA_ c.23.10.6 * 2.7e-14 25.1 %
:BLT:SWISS 294->381 FPG_AGRT5 5e-04 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56224.1 GT:GENE BAD56224.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1543538..1544779 GB:FROM 1543538 GB:TO 1544779 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56224.1 LENGTH 413 SQ:AASEQ MSAKPERQLPDALFGPPPEPAEPERRGAREDAARTVPDELFKQKVSAKPERQLPDALFGGPPASTTADATDAGNDHPTAQPDDPANSGTEEAAAVTDAVSEAEAAAAPVTVATADASSREAVSPAADPPTEASPVESGDAEPSAPTVPQAPAESAAADSLADVPAPAQDAAGAVASAESKRPVLLVIADSLAYFGPKGGLPADHPRIWPNLVAAELDWDVELVGRIGWTCRDAYWALIGDPRVWAAVPRAGAVVFAVGGMDTLPSPLPTALRELIRYVRPPALRRRVRATYNWLQPRLSKLGRPVALPPQVSIDYLEQSRQALAQLRPDLPVIGVLPSVHNCEAYGRVHSGRPRAVKALREWSARTAVPLVDLGEAVRENIFSGEANPDGIHWGWDGHTAVANAMVKTLQEVR GT:EXON 1|1-413:0| BL:SWS:NREP 1 BL:SWS:REP 294->381|FPG_AGRT5|5e-04|33.3|87/100| SEG 15->34|gpppepaeperrgaredaar| SEG 65->72|ttadatda| SEG 89->118|teeaaavtdavseaeaaaapvtvatadass| SEG 150->177|apaesaaadsladvpapaqdaagavasa| SEG 276->289|ryvrppalrrrvra| RP:PDB:NREP 1 RP:PDB:REP 182->412|3bzwB|2e-16|12.7|213/239| RP:SCP:NREP 1 RP:SCP:REP 180->412|3bzwA1|3e-16|14.2|219/248|c.23.10.9| HM:SCP:REP 178->412|1vjgA_|2.7e-14|25.1|187/0|c.23.10.6|1/1|SGNH hydrolase| OP:NHOMO 25 OP:NHOMOORG 25 OP:PATTERN -------------------------------------------------------------------- --------------11111-11--1111111111111111------------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 233 STR:RPRED 56.4 SQ:SECSTR ###################################################################################################################################################################################cccEEEEEEcTTTcccccTTTTGGGcccHHHHHHHHHccEEEEcccTTccGGGHHHHHEHHHHHHHHHTTTccEEEEEcHHHHHTTccccccEEEEEEEEHHHTcHHEEEEEcccccEEEEEEEEEccTTcHHHHHHHHHHHHHHHHcTTcEEEEEcccccccEEccTTcEEcHHHHHHHHHHHHHHTccEEcHHHHTccTcGGGGGGEEEEEEcHHHHHHHHHHHHGGGccc# DISOP:02AL 1-5, 8-33, 38-183| PSIPRED ccccccHHHHHHHcccccccccccccccHHHcccccccHHHcccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccHHHHcccccccccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccEEEEEEcccHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccEEcccHHHHHHHHHHHHHHHHcc //