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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56246.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  36/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:596 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   57->190 2j69A PDBj 2e-07 32.1 %
:RPS:PDB   54->237 2dy1A PDBj 3e-06 20.3 %
:RPS:SCOP  50->196 1tpzA  c.37.1.8 * 7e-07 20.2 %
:HMM:SCOP  14->263 2akaB1 c.37.1.8 * 2.7e-21 30.0 %
:RPS:PFM   58->205 PF00350 * Dynamin_N 4e-05 31.0 %
:HMM:PFM   58->205 PF00350 * Dynamin_N 5.5e-12 24.3 148/168  
:HMM:PFM   503->555 PF00125 * Histone 0.00089 28.3 53/75  
:BLT:SWISS 16->208 YOR6_CALSR 2e-11 27.9 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56246.1 GT:GENE BAD56246.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1574969..1576759 GB:FROM 1574969 GB:TO 1576759 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD56246.1 LENGTH 596 SQ:AASEQ MSAAAGLESATVKHPDAMAPLIRMLDELREMTGSAGRDDLGGRLGMVRARISDPRVRLVVVGDPKNGMSTLVNSLVGAQVSATDAERSAPVIVEYGPEPTATLVKAAGPGRTERQPVDRLSSRPALTAADVVRAEFTEPSALLADGIVLMDAPGGGDERVTWSMIAAADAVLYVTEASSELSPAQLDYLQRVQQFCPTVICVLNKIDLYPQWSHVQQRDRDLLDAAGLGFAVAPVSARMHRPGADPHRDIESGVPQLIDHLRDQVIARADAVARDAALRDILLSADNLAVTLYSEAEALRDPRRRGEITQQLMVARDEADQLRQRTANWQIVLADGAAELMADIEHDLRHRLRRLTRDAEAEIARTDPARGWKEFGADLDARICEAVEENFVMAHYRSVELCEQVAAKFPSGPRTPPLPDLRLTDPGEVLEHVAPLEPLDSATPGVTQQVLSGLRGSYGGILMVGLATSLLGMSLVNWYSAGAGVLLGVNAIWDDRKNRKLRRRAEAKVAVARLMDDVVFQVGKESRNRLRAMQRSLRDHFTDIATDALRAADEALRAAEEAYGRYGDRREDRLAELDAQLGKLRAVRDRAADLAA GT:EXON 1|1-596:0| BL:SWS:NREP 1 BL:SWS:REP 16->208|YOR6_CALSR|2e-11|27.9|190/402| COIL:NAA 30 COIL:NSEG 1 COIL:REGION 543->572| TM:NTM 1 TM:REGION 456->478| SEG 265->283|viaradavardaalrdill| SEG 346->358|hdlrhrlrrltrd| SEG 413->426|prtpplpdlrltdp| SEG 499->514|rklrrraeakvavarl| SEG 547->562|dalraadealraaeea| SEG 584->595|lravrdraadla| BL:PDB:NREP 1 BL:PDB:REP 57->190|2j69A|2e-07|32.1|131/671| RP:PDB:NREP 1 RP:PDB:REP 54->237|2dy1A|3e-06|20.3|158/660| RP:PFM:NREP 1 RP:PFM:REP 58->205|PF00350|4e-05|31.0|145/165|Dynamin_N| HM:PFM:NREP 2 HM:PFM:REP 58->205|PF00350|5.5e-12|24.3|148/168|Dynamin_N| HM:PFM:REP 503->555|PF00125|0.00089|28.3|53/75|Histone| GO:PFM:NREP 2 GO:PFM GO:0003924|"GO:GTPase activity"|PF00350|IPR001401| GO:PFM GO:0005525|"GO:GTP binding"|PF00350|IPR001401| RP:SCP:NREP 1 RP:SCP:REP 50->196|1tpzA|7e-07|20.2|129/395|c.37.1.8| HM:SCP:REP 14->263|2akaB1|2.7e-21|30.0|217/0|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 44 OP:NHOMOORG 37 OP:PATTERN -----------------------------------------------1-------------------- --------------1--11-11--1111111111112123------------11------11--112-------------------------------------------------------------------------1-----1-----------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-3----------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 212 STR:RPRED 35.6 SQ:SECSTR ####################################################ccEEEEEEEEcTTccHHHHHHHHHHHTTccccccccccGEEEETGGTcccccccHccTTHHHHTTHHHcccHHHcccccEEEEEEETTEcccEEEEEEEccccGGGHHHHHHHHHccEEEEEEETTTcccHHHHHHHHHHHHTTccEEEEEEcGGGcccHHHHHHHHHHHHccEEHEcEEEEEETTcccccccccHHHHHHHHHHHHHHTTc############################################################################################################################################################################################################################################################################################################################################ DISOP:02AL 1-6, 432-443, 595-596| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHcccccccccccccEEEEEEcccccEEEEEEccccccccccHHHHHHcccccccccEEEEEEEccHHHcccEEEEEccccccHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHccccccEEEEccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHccccccccccccHHcccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //