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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD56250.1
DDBJ      :             putative sulfate ABC transporter permease
Swiss-Prot:             

Homologs  Archaea  51/68 : Bacteria  641/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   93->246 3d31C PDBj 1e-21 35.1 %
:RPS:PDB   167->203 3dhwA PDBj 7e-11 21.6 %
:RPS:SCOP  40->236 2r6gG1  f.58.1.1 * 4e-23 18.3 %
:RPS:PFM   109->223 PF00528 * BPD_transp_1 9e-10 36.5 %
:HMM:PFM   85->270 PF00528 * BPD_transp_1 1.9e-23 23.4 175/185  
:BLT:SWISS 33->241 CYST_CHLAT 1e-46 44.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56250.1 GT:GENE BAD56250.1 GT:PRODUCT putative sulfate ABC transporter permease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1580572..1581417 GB:FROM 1580572 GB:TO 1581417 GB:DIRECTION + GB:PRODUCT putative sulfate ABC transporter permease GB:PROTEIN_ID BAD56250.1 LENGTH 281 SQ:AASEQ MSDSSRKPTRSPLAWLRVTGSVGPLGIATAVLWLSIIVLLPLAALTVTSFEDGWGGFWDAVTAPAALDSLRITVLVSVVVALINVVMGTLIAWVLVRDEFPGKGVVNALIDLPFALPTIVASIVLLSLYGPQSPIDIHLNATQPGLVVALAFVTLPFVVRSVQPVLIEADREVEQAALSLGADNWTTFRRIVLPALTPAVISGGGLAFARAIGEYGSVVLIGGAIPRKTEMASQYIQKQIEIDRPINAAAVSVALLAIAFVTLLVLRLLADRAARKEQASR GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 33->241|CYST_CHLAT|1e-46|44.5|209/286| TM:NTM 6 TM:REGION 24->46| TM:REGION 65->87| TM:REGION 106->128| TM:REGION 143->165| TM:REGION 196->218| TM:REGION 247->269| SEG 74->86|vlvsvvvalinvv| SEG 248->259|aaavsvallaia| SEG 263->275|llvlrlladraar| BL:PDB:NREP 1 BL:PDB:REP 93->246|3d31C|1e-21|35.1|154/248| RP:PDB:NREP 1 RP:PDB:REP 167->203|3dhwA|7e-11|21.6|37/203| RP:PFM:NREP 1 RP:PFM:REP 109->223|PF00528|9e-10|36.5|115/195|BPD_transp_1| HM:PFM:NREP 1 HM:PFM:REP 85->270|PF00528|1.9e-23|23.4|175/185|BPD_transp_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 40->236|2r6gG1|4e-23|18.3|197/284|f.58.1.1| OP:NHOMO 2360 OP:NHOMOORG 700 OP:PATTERN --112-11111111111------1223452211-12136665312142-162311424313---1--- -11-21222222-143322-22--442222232444433312221221422112131111115-2214123111111111114-1111----11--------1--1-11----------------1213213432222223--143234222433441-1---33255551-1-----1--1--1222-1-3112221244232224225322112241215112------76-11111111111111122121--1-------------------------------------------------------------------121444432431312333----3-21143352553-21-1-1------21--4443-----33CBE4373667699AA9A97AAF-554443442B5-A998766699A8GA1--15GA9CC85322222222-33-2525-----------------------------1-111-49966999A7D43444CCCE666736CDA6345-17763223345B47C67A1333552333333222444-27242432-5333-43113434-42344313312111111-1-111111111231111443141112-115555112444517125112---22-------34652533443333333-4333334332433223323333784443233333332343433533323332-45555555555522-2---------41518444524211111332333232434355756685BA97A774A89---------12223555551224222333333332222--12332222-------------------------------------21---1--1151 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----2-----------222-----12---1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 205 STR:RPRED 73.0 SQ:SECSTR ########################################HHHH#HHHTTTTTHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccTTHHHHHHHHHGGGTccHHHHHHHHHHHHcTTcTTTcccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHHTTccHHHHHHHHHHHcTTTTTHHH################################### DISOP:02AL 1-17, 272-281| PSIPRED ccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //